More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0620 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0620  response regulator receiver protein  100 
 
 
142 aa  283  7e-76  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  51.49 
 
 
147 aa  134  6.0000000000000005e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  47.69 
 
 
147 aa  123  1e-27  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  47.37 
 
 
144 aa  117  6e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  48.46 
 
 
151 aa  116  9.999999999999999e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  47.2 
 
 
141 aa  110  5e-24  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  43.08 
 
 
139 aa  109  1.0000000000000001e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  47.66 
 
 
157 aa  109  1.0000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0836  two component, sigma54 specific, Fis family transcriptional regulator  44.35 
 
 
469 aa  107  7.000000000000001e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0464248 
 
 
-
 
NC_013223  Dret_0200  two component, sigma54 specific, transcriptional regulator, Fis family  40.77 
 
 
449 aa  104  3e-22  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2217  two component transcriptional regulator, winged helix family  38.1 
 
 
276 aa  104  3e-22  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00294817  normal 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  46.15 
 
 
153 aa  105  3e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  44.09 
 
 
135 aa  103  7e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  39.23 
 
 
508 aa  103  8e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  38.24 
 
 
159 aa  103  1e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  45.08 
 
 
136 aa  102  1e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_0332  two component, sigma54 specific, transcriptional regulator, Fis family  43.55 
 
 
469 aa  102  2e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.465248 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  45.38 
 
 
147 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  44.62 
 
 
143 aa  102  2e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  43.55 
 
 
131 aa  101  4e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  39.13 
 
 
458 aa  100  5e-21  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  40.34 
 
 
472 aa  100  7e-21  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  40.65 
 
 
494 aa  100  7e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002951  regulatory protein LuxO  38.94 
 
 
468 aa  100  9e-21  Vibrio sp. Ex25  Bacteria  normal  0.0508152  n/a   
 
 
-
 
NC_013173  Dbac_3323  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
458 aa  100  9e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.581416  n/a   
 
 
-
 
NC_007519  Dde_3536  two component Fis family transcriptional regulator  38.46 
 
 
447 aa  100  9e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02959  hypothetical protein  38.94 
 
 
467 aa  100  1e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_1488  two component, sigma54 specific, Fis family transcriptional regulator  36.23 
 
 
464 aa  99.4  1e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.781886  normal  0.688737 
 
 
-
 
NC_007519  Dde_0109  two component Fis family transcriptional regulator  37.76 
 
 
466 aa  99  2e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  44.74 
 
 
121 aa  99  2e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  44.74 
 
 
128 aa  98.2  3e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  41.6 
 
 
456 aa  98.6  3e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  39.69 
 
 
142 aa  97.8  4e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  38.06 
 
 
461 aa  97.4  5e-20  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  38.06 
 
 
461 aa  97.4  5e-20  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  38.06 
 
 
461 aa  97.4  5e-20  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  38.06 
 
 
461 aa  97.4  5e-20  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  38.06 
 
 
461 aa  97.4  5e-20  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  38.81 
 
 
476 aa  97.1  7e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  39.71 
 
 
135 aa  97.1  7e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  36.15 
 
 
513 aa  97.1  8e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  38.03 
 
 
457 aa  96.7  9e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0673  two component, sigma54 specific, transcriptional regulator, Fis family  41.48 
 
 
458 aa  96.3  1e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2158  two component, sigma54 specific, transcriptional regulator, Fis family  38.58 
 
 
453 aa  95.9  1e-19  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  40.32 
 
 
135 aa  96.3  1e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  37.31 
 
 
461 aa  96.3  1e-19  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_011145  AnaeK_0673  two component, sigma54 specific, transcriptional regulator, Fis family  41.48 
 
 
457 aa  96.3  1e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2806  two component, sigma54 specific, Fis family transcriptional regulator  40.65 
 
 
450 aa  95.9  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  38.89 
 
 
451 aa  94.7  3e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  38.71 
 
 
129 aa  94.7  3e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  42.11 
 
 
119 aa  95.1  3e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  41.38 
 
 
501 aa  95.1  3e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  39.06 
 
 
457 aa  94.7  4e-19  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0684  two component, sigma54 specific, Fis family transcriptional regulator  41.22 
 
 
456 aa  94.7  4e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  37.98 
 
 
461 aa  94.4  5e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  40.15 
 
 
455 aa  94.4  5e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2713  two component, sigma54 specific, transcriptional regulator, Fis family  38.69 
 
 
454 aa  94  6e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1394  two component, sigma54 specific, Fis family transcriptional regulator  38.21 
 
 
450 aa  94  7e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.205793  normal  0.0550645 
 
 
-
 
NC_014150  Bmur_0291  two component, sigma54 specific, transcriptional regulator, Fis family  38.66 
 
 
444 aa  93.6  8e-19  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00612417  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  42.98 
 
 
129 aa  93.6  9e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_0984  two component, sigma54 specific, Fis family transcriptional regulator  37.4 
 
 
455 aa  93.6  9e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3478  two component, sigma54 specific, Fis family transcriptional regulator  39.52 
 
 
450 aa  92.8  1e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  42.74 
 
 
151 aa  93.2  1e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  39.13 
 
 
463 aa  93.2  1e-18  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_011312  VSAL_I1874  two component signal response regulator LuxO  36.84 
 
 
469 aa  92.8  1e-18  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0317984  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  40.17 
 
 
470 aa  92  2e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_007005  Psyr_3995  helix-turn-helix, Fis-type  40.77 
 
 
444 aa  92  2e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0385153 
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  33.08 
 
 
264 aa  92  2e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_008463  PA14_72720  putative two-component response regulator  39.26 
 
 
447 aa  92.8  2e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.269979  normal 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  40 
 
 
126 aa  92.4  2e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  36.29 
 
 
239 aa  91.7  3e-18  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_009675  Anae109_3404  two component, sigma54 specific, Fis family transcriptional regulator  36.59 
 
 
455 aa  91.7  3e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.235439  normal  0.675632 
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  32.31 
 
 
266 aa  91.7  3e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  36.67 
 
 
471 aa  91.7  3e-18  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
NC_009483  Gura_3375  two component, sigma-54 specific, Fis family transcriptional regulator  39.1 
 
 
461 aa  92  3e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2737  response regulator receiver domain-containing protein  37.4 
 
 
139 aa  91.7  3e-18  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00154696  n/a   
 
 
-
 
NC_011830  Dhaf_4674  two component, sigma54 specific, transcriptional regulator, Fis family  41.46 
 
 
463 aa  92  3e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  33.08 
 
 
448 aa  91.3  4e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  39.26 
 
 
301 aa  91.3  4e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  34.33 
 
 
465 aa  91.3  4e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1117  response regulator  42.2 
 
 
127 aa  90.9  5e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  35.38 
 
 
472 aa  90.9  5e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  41.54 
 
 
490 aa  90.9  5e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  35.65 
 
 
448 aa  90.9  5e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3443  response regulator receiver protein  36.15 
 
 
223 aa  90.9  6e-18  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  43.55 
 
 
139 aa  90.9  6e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_009012  Cthe_0583  response regulator receiver protein  39.69 
 
 
394 aa  90.5  7e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0879  two component, sigma54 specific, transcriptional regulator, Fis family  39.5 
 
 
466 aa  90.5  7e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2109  two component, sigma54 specific, transcriptional regulator, Fis family  39.68 
 
 
515 aa  90.5  8e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  35.88 
 
 
142 aa  90.1  8e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  41.18 
 
 
157 aa  90.1  9e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  40.94 
 
 
465 aa  90.1  9e-18  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_013173  Dbac_1017  two component, sigma54 specific, transcriptional regulator, Fis family  40.6 
 
 
445 aa  90.1  1e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.246569  n/a   
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  38.21 
 
 
453 aa  89.7  1e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4292  sigma-54 dependent transcriptional regulator/response regulator  38.46 
 
 
444 aa  89.7  1e-17  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1994  two component signal transduction response regulator  41.44 
 
 
477 aa  90.1  1e-17  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  40.48 
 
 
508 aa  89.7  1e-17  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_007760  Adeh_0833  two component, sigma54 specific, Fis family transcriptional regulator  38.66 
 
 
466 aa  89.7  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.96038  n/a   
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  41.28 
 
 
124 aa  89.7  1e-17  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_010814  Glov_2633  two component, sigma54 specific, transcriptional regulator, Fis family  34.62 
 
 
467 aa  89.7  1e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
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