Gene Psyr_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3995 
Symbol 
ID3369531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4755766 
End bp4757100 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content64% 
IMG OID637654353 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_237063 
Protein GI66047222 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0385153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATT CGGTCATCGT GGTAGACGAC GAGGCGCCCA TTCGGCAAGC CGTCGAACAA 
TGGCTGACGC TGTCGGGGTT CGAGGTGCAA GTCTTCGCCC GCGCCGAAGA GTGCCTGGCG
CACCTACCGG AACACTTCCC CGGCGTCGTG CTGACCGATG TGCGCATGCC AGGCATGAGC
GGTCTGGAGC TGCTGACCCG GTTGCAAGGC GCAGACCGCG ACCTGCCGGT CATCCTCCTG
ACCGGTCATG GCGATGTGCC GATGGCTGTG GAGGCGATGC GCGAAGGGGC CTATGACTTT
CTGGAAAAAC CCTTCAGCCC GGAAACCCTG ATCAGCAACC TGCGGCGCGC CCTCGAGAAA
CGCCAGTTGG TGCTGGAAAA CCGCCGCCTG CATGAGCAGG CCGATGCCAG AACCCGCCTG
GACGCCACGC TGCTCGGCGT ATCGCCCGGC ATGCAGACAC TGCGCCGCCA GGTGCTGGAA
CTGGCGCAAC TGCCGGTCAA TGTGATCATT CGCGGGGAAA CCGGCAGCGG CAAGGAACTG
GTCGCTCGCT GCCTGCATGA TTTCGGGCCG CGCGCCGCCA GACCTTTTGT TGCACTCAAC
TGCGCGGCCA TCCCGGAGCA CCTGTTCGAA GCCGAGCTGT TCGGCCACGA AAGCGGCGCC
TTCACCGGCG CGCAGGGCAA ACGCATCGGT CGTCTGGAGT ATGCCGACGG CGGCACGGTG
TTCCTTGATG AAATCGAGAG CATGCCGATG GCACAGCAGG TCAAGCTGCT GCGCGTTCTG
CAGGACAAGC GCCTTGAGCG GCTGGGCTCG AATCAGAGTA TCGACGTCGA CCTGCGAATC
ATTGCCGCGA CCAAGCCTGA TCTTCTCGAA GAAGCGCGTG CCGGGCGCTT CCGCGAAGAT
CTGGCCTATC GCCTGAACGT TGCCGAGCTG CGCCTGCCGC CGCTGCGCGA GCGTCTTGAA
GACATCGCGC AACTGTTCAG CCACTTCGCC CGCGCCGCCG CCGAACGCGT GGGCCGGGAG
GCGCCCGCGC TGGATGCAGC GCGCCTGAGC CTTTTGCTCG GCCATGACTG GCCTGGCAAC
GTGCGCGAGC TGGCCAATGC CGCCGAGCGG CAGGCGCTGG GTCTGGAGCA GGCCCTGCCG
CAACCTGATA CTCAATGGCA GGGACATTCA TTGGCGGCGC GTCAGGAAGC CTTCGAAGCA
CAATGCCTGC GCGCTTCGCT GGCCCGTCAT AAAGGCGACA TCAAGGCGGT GCTCAATGAG
CTGCAACTGC CTCGAAGGAC GCTGAACGAG AAGATGCAGC GCCATGCTCT GGTACGCGAA
ACGTTCCTCG AATGA
 
Protein sequence
MLNSVIVVDD EAPIRQAVEQ WLTLSGFEVQ VFARAEECLA HLPEHFPGVV LTDVRMPGMS 
GLELLTRLQG ADRDLPVILL TGHGDVPMAV EAMREGAYDF LEKPFSPETL ISNLRRALEK
RQLVLENRRL HEQADARTRL DATLLGVSPG MQTLRRQVLE LAQLPVNVII RGETGSGKEL
VARCLHDFGP RAARPFVALN CAAIPEHLFE AELFGHESGA FTGAQGKRIG RLEYADGGTV
FLDEIESMPM AQQVKLLRVL QDKRLERLGS NQSIDVDLRI IAATKPDLLE EARAGRFRED
LAYRLNVAEL RLPPLRERLE DIAQLFSHFA RAAAERVGRE APALDAARLS LLLGHDWPGN
VRELANAAER QALGLEQALP QPDTQWQGHS LAARQEAFEA QCLRASLARH KGDIKAVLNE
LQLPRRTLNE KMQRHALVRE TFLE