Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3995 |
Symbol | |
ID | 3369531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4755766 |
End bp | 4757100 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654353 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_237063 |
Protein GI | 66047222 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0385153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATT CGGTCATCGT GGTAGACGAC GAGGCGCCCA TTCGGCAAGC CGTCGAACAA TGGCTGACGC TGTCGGGGTT CGAGGTGCAA GTCTTCGCCC GCGCCGAAGA GTGCCTGGCG CACCTACCGG AACACTTCCC CGGCGTCGTG CTGACCGATG TGCGCATGCC AGGCATGAGC GGTCTGGAGC TGCTGACCCG GTTGCAAGGC GCAGACCGCG ACCTGCCGGT CATCCTCCTG ACCGGTCATG GCGATGTGCC GATGGCTGTG GAGGCGATGC GCGAAGGGGC CTATGACTTT CTGGAAAAAC CCTTCAGCCC GGAAACCCTG ATCAGCAACC TGCGGCGCGC CCTCGAGAAA CGCCAGTTGG TGCTGGAAAA CCGCCGCCTG CATGAGCAGG CCGATGCCAG AACCCGCCTG GACGCCACGC TGCTCGGCGT ATCGCCCGGC ATGCAGACAC TGCGCCGCCA GGTGCTGGAA CTGGCGCAAC TGCCGGTCAA TGTGATCATT CGCGGGGAAA CCGGCAGCGG CAAGGAACTG GTCGCTCGCT GCCTGCATGA TTTCGGGCCG CGCGCCGCCA GACCTTTTGT TGCACTCAAC TGCGCGGCCA TCCCGGAGCA CCTGTTCGAA GCCGAGCTGT TCGGCCACGA AAGCGGCGCC TTCACCGGCG CGCAGGGCAA ACGCATCGGT CGTCTGGAGT ATGCCGACGG CGGCACGGTG TTCCTTGATG AAATCGAGAG CATGCCGATG GCACAGCAGG TCAAGCTGCT GCGCGTTCTG CAGGACAAGC GCCTTGAGCG GCTGGGCTCG AATCAGAGTA TCGACGTCGA CCTGCGAATC ATTGCCGCGA CCAAGCCTGA TCTTCTCGAA GAAGCGCGTG CCGGGCGCTT CCGCGAAGAT CTGGCCTATC GCCTGAACGT TGCCGAGCTG CGCCTGCCGC CGCTGCGCGA GCGTCTTGAA GACATCGCGC AACTGTTCAG CCACTTCGCC CGCGCCGCCG CCGAACGCGT GGGCCGGGAG GCGCCCGCGC TGGATGCAGC GCGCCTGAGC CTTTTGCTCG GCCATGACTG GCCTGGCAAC GTGCGCGAGC TGGCCAATGC CGCCGAGCGG CAGGCGCTGG GTCTGGAGCA GGCCCTGCCG CAACCTGATA CTCAATGGCA GGGACATTCA TTGGCGGCGC GTCAGGAAGC CTTCGAAGCA CAATGCCTGC GCGCTTCGCT GGCCCGTCAT AAAGGCGACA TCAAGGCGGT GCTCAATGAG CTGCAACTGC CTCGAAGGAC GCTGAACGAG AAGATGCAGC GCCATGCTCT GGTACGCGAA ACGTTCCTCG AATGA
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Protein sequence | MLNSVIVVDD EAPIRQAVEQ WLTLSGFEVQ VFARAEECLA HLPEHFPGVV LTDVRMPGMS GLELLTRLQG ADRDLPVILL TGHGDVPMAV EAMREGAYDF LEKPFSPETL ISNLRRALEK RQLVLENRRL HEQADARTRL DATLLGVSPG MQTLRRQVLE LAQLPVNVII RGETGSGKEL VARCLHDFGP RAARPFVALN CAAIPEHLFE AELFGHESGA FTGAQGKRIG RLEYADGGTV FLDEIESMPM AQQVKLLRVL QDKRLERLGS NQSIDVDLRI IAATKPDLLE EARAGRFRED LAYRLNVAEL RLPPLRERLE DIAQLFSHFA RAAAERVGRE APALDAARLS LLLGHDWPGN VRELANAAER QALGLEQALP QPDTQWQGHS LAARQEAFEA QCLRASLARH KGDIKAVLNE LQLPRRTLNE KMQRHALVRE TFLE
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