| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4292 |
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| Symbol | |
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| ID | 1185973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4835207 |
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| End bp | 4836541 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637395634 |
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| Product | sigma-54 dependent transcriptional regulator/response regulator |
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| Protein accession | NP_794048 |
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| Protein GI | 28871429 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACT CGGTCATCGT GGTAGACGAC GAGGCACCTA TCCGGCAAGC CGTCGAACAA
TGGCTGACGC TGTCAGGTTT TGAGGTGCAG GTCTTCGCCC GCGCCGAAGA GTGCCTGGCG
CAGATGCCGG AGCATTTCCC GGGCGTGGTG CTGACCGATG TGCGCATGCC GGGCATGACC
GGCCTGCAAT TGCTGACCCA CCTGCACGCC CTTGACCGGG ACCTGCCCGT CATTCTGCTG
ACCGGCCACG GCGATGTGCC CATGGCAGTA GAGGCCATGC GCGAAGGTGC CTATGATTTT
CTGGAAAAGC CATTCAGCCC GGAAACGTTG ATCAGCAACC TGCGGCGAGC GCTGGAAAAA
CGCCAACTGG TACTGGAAAA CCGTCGCCTG CATGAACAGG CCGACGCCAG AACCCGGCTG
GATGCCACCC TGCTCGGCGT ATCCCCAAGC CTGCAGACCC TGCGGCGCCA GGTGCTGGAG
CTGTCGCAAC TGCCTGTCAA CGTGATCATT CGTGGTGAAA CCGGCAGCGG CAAAGAGCTG
GTGGCTCGCT GCCTTCACGA CTTCGGCCCA CGCGCCGGCA AACCCTTCGT GGCACTCAAC
TGTGCCGCCA TCCCGGAATA CCTGTTCGAG GCCGAGCTGT TCGGGCACGA AAGTGGCGCA
TTTACCGGCG CGCAGGGTAA ACGTATCGGG CGGCTGGAAT ACGCCGACGG CGGTACGGTG
TTTCTCGATG AAATAGAGAG CATGCCCTTG GCGCAACAGG TCAAGCTGCT GCGCGTCCTG
CAGGACAAGT GCCTTGAAAG GCTGGGCTCC AACCAGAGCA TCAAGGTTGA CCTGCGGATC
ATTGCGGCGA CCAAACCGGA CCTGCTCGAA GAAGCTCGCG CCGGGCGCTT CCGCGAGGAC
CTGGCCTACC GACTGAACGT TGCCGAGCTG CGCTTGCCTG CGCTGCGCGA CCGGCTTGAG
GACATTGCGC AACTGTTCAG CCATTTCAGC AGGGCCGCCG CCGAGCGTAT GGGACGTGAG
GCCCCCGCCC TGAGCGCCGC GCGCCTGAAC CAGCTGCTCA GCCACGACTG GCCCGGCAAT
GTGCGCGAAC TCGCCAATGC GGCCGAGCGG CAGACCCTGG GCCTGGAAAT GACGCCACCG
CAAGCCGACA CTCAACTACC AGGACATTCA CTGGCGGCAC GTCAGGAAGC CTTCGAAGCG
CAATGCCTGC GCGCCTCATT GACCCGCCAC AAAGGCGATA TCAAGGCTGT GCTCAACGAG
TTGCAATTGC CCCGGAGGAC GCTGAACGAG AAAATGCAGC GTCATGCCCT GGTGCGGGAA
ATGTTTCTCG GCTGA
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| Protein sequence | MLNSVIVVDD EAPIRQAVEQ WLTLSGFEVQ VFARAEECLA QMPEHFPGVV LTDVRMPGMT
GLQLLTHLHA LDRDLPVILL TGHGDVPMAV EAMREGAYDF LEKPFSPETL ISNLRRALEK
RQLVLENRRL HEQADARTRL DATLLGVSPS LQTLRRQVLE LSQLPVNVII RGETGSGKEL
VARCLHDFGP RAGKPFVALN CAAIPEYLFE AELFGHESGA FTGAQGKRIG RLEYADGGTV
FLDEIESMPL AQQVKLLRVL QDKCLERLGS NQSIKVDLRI IAATKPDLLE EARAGRFRED
LAYRLNVAEL RLPALRDRLE DIAQLFSHFS RAAAERMGRE APALSAARLN QLLSHDWPGN
VRELANAAER QTLGLEMTPP QADTQLPGHS LAARQEAFEA QCLRASLTRH KGDIKAVLNE
LQLPRRTLNE KMQRHALVRE MFLG
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