Gene Dhaf_4674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4674 
Symbol 
ID7261703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4986355 
End bp4987746 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content53% 
IMG OID643564587 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002461107 
Protein GI219670672 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA GTCAAAAAAT TTTAATCCTT GATGATGAAG AGGCTCTGCG GGCCATTATC 
GCCCAGCGTT TAAAGCGTAA GGGCTATGAG GTCCTGGAGG CCGGCACCGC CGGTGAAGGG
TTGGCTTTCC TTAACGATAC CCTGGTCGAT GCCGTCTTGT TGGATATCAA GCTGCCGGAC
GGTGACGGGC TGCTCCTGCT GCCCAAAATC AAGCAGATGC AAACCGATCT GCAGGTCATT
ATGCTGACCG GGAACGGGAC CATTGAATCC GCCATCGAAG CGATGAAACT GGGCGCCTAT
GATTATCTGA CCAAGCCCTG CAATTTATCA GAGCTGGAAA TCACTCTGCA AAAAGCTCTG
GAAAAACGCA GGCTGCTGCT GGAAAACACC GGTCTTCGTC AGGTTGTCAG CCGCCATGCT
TCCGAATTAA AAATTGTTGC CGAAAGTGAA GCCATGACGT CACTCCTCAA CATGACCCGT
AAAGTTGCCC AGACCGACAC TTCCGTCCTC ATCCAAGGGG AAAGCGGTGT CGGCAAGGAG
TTGATTGCCC AGGCCATCCA TTTCTGGAGC TCCCGGGTCA ATCGCCCCTG CATCCCCGTC
AATGCCGGAG CCATCCCGGA GACGCTGATC GAAAGCGAAC TTTTCGGGCA CGAGAAAGGT
GCCTTTACCG GTGCCGGAAC TCAAAAAATC GGCTTGGTGG AAATGGCCGA CAACGGCACT
CTCTTTCTCG ATGAGATTGG GGAAATGCCT TTAGCTATTC AAGTCAAGCT GCTGCGGTTT
TTGGAAAGCG GCGAATTCCG GCGGGTGGGG GATACCCGGC TGCGGCAAGT TGATGTGCGG
ATTGTGGCGG CAACAAACCG TGACCTGGGA CAGGAAATAG CTCAGGGCCG GTTTCGTGAG
GATCTCTTCT ATCGCTTAAA CGGCCTGACC CTTCTGGTTC CTCCCCTGCG GGAACGGCGT
GGGGATATCC TCCCCCTTGT CCATCACTTC CTGAAAACCC AGCGCAAAGA GTTGCCCCAT
GAGCGGTATA GCTTAGCCCC GGAGACCCAG GAGCAGTTAT TGAATTATGA TTTTCCTGGC
AATACCCGTG AACTCTTCCA TCTTATTGAA CGGGGACAAA TCCTCTCTGC CGACGGCATC
ATCACCCCCG GGGACATTTG GCCGGAAAAG TCCGCTCCGA CCCTCAAGTC CTCATCTGCT
TTCGCTTCAG AAGAAGAATT CCTGCAGATA TTTCAGGAGC ATCCCTACCC TTCCTTAGAC
GATGTGGAAA AGGCCTATAT CCTGTCTACT CTGAAGAAAG CCAAGGGCAA TAAAACTCAA
ACAGCCCATA TCCTGGGCAT AAGCGTGCGC AATCTCTACC GCAAGCTTCA GACTTACGGT
GTAAGCGAGT GA
 
Protein sequence
MKHSQKILIL DDEEALRAII AQRLKRKGYE VLEAGTAGEG LAFLNDTLVD AVLLDIKLPD 
GDGLLLLPKI KQMQTDLQVI MLTGNGTIES AIEAMKLGAY DYLTKPCNLS ELEITLQKAL
EKRRLLLENT GLRQVVSRHA SELKIVAESE AMTSLLNMTR KVAQTDTSVL IQGESGVGKE
LIAQAIHFWS SRVNRPCIPV NAGAIPETLI ESELFGHEKG AFTGAGTQKI GLVEMADNGT
LFLDEIGEMP LAIQVKLLRF LESGEFRRVG DTRLRQVDVR IVAATNRDLG QEIAQGRFRE
DLFYRLNGLT LLVPPLRERR GDILPLVHHF LKTQRKELPH ERYSLAPETQ EQLLNYDFPG
NTRELFHLIE RGQILSADGI ITPGDIWPEK SAPTLKSSSA FASEEEFLQI FQEHPYPSLD
DVEKAYILST LKKAKGNKTQ TAHILGISVR NLYRKLQTYG VSE