| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3478 |
|---|
| Symbol | |
|---|
| ID | 5382000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 837980 |
|---|
| End bp | 839332 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640836160 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001372013 |
|---|
| Protein GI | 153010799 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGCA AGTCACCCTC CGTTATTCTT GTCGACGATG ACAAGGCGCT CCGCCGCGCC
ACTCGTCAAA CGCTTGAGCT TGCCGGTTTT GAGGTTACTG ATTTTCCAAG CGCACTGGAT
GCGTTGAACA GCGTTACTTT TGAGTATGAT GGCGTTGTCG TTACCGATGT CCGCATGCCG
CAGATCGACG GTCTCCAATT CTTTGCCCGG ATCAAAACCA TTGACCCCGA TTTGCCAGTA
ATCCTGATTA CTGGCCACGG TGATATTCCG ATGGCGGTGC AAGCCATTCA GGACGGTGCC
TATGATTTCA TCGCTAAGCC GTTTGCAGCC GACAGGCTCG TGCACAGCAT CCGTCGTGCA
TGGGAAAAGC GACAGCTTAT CGTTGAAAAC CGCGCCTTAC GCGAAGCCGC CGAGAATGTG
GAGGGCGATC TGCCGTTGAT CGGCCAGACA CCGGCGATGG AAAATCTGCG CCGTACCTTG
CGCGATATAG CCGATACGGA TGTTGATGTG CTCGTGGCTG GTGAAACTGG CAGTGGCAAG
GAAGTCGTCG CACAGTTGCT GCACAACTGG GGCCATCGTC GCAAAGGCAA TTTCGTAGCG
CTCAACTGCG GGGCCTTGCC CGAAACGGTG ATTGAAAGCG AACTGTTCGG TCACGAGGCA
GGTGCTTTCA CGGGAGCTCA GAAAAAGCGG CTCGGACGGG TTGAACATGC AAGTGGTGGC
ACGCTGTTTC TCGATGAAAT TGAAAGCATG CCTGCAGCAA CGCAAGTGAA ACTGCTGCGC
GTCCTTGAGA TGCGCGAAAT CACACCACTC GGCACGAATG AGGTTCGCCC GGTCGATCTG
CGGGTTGTGG CTGCAGCAAA GATCGACCTC GGTGACCCCG CCCAGAGAGG CGACTTCCGT
GAGGACCTCT ATTACCGGCT GAATGTTGTC ACGCTTTCCA TCCCGCCGCT GAGAGAAAGA
CGAGACGACA TTCCGTTGCT TTTCGCACAT TTCCTGACGC GAGCGTCGAA ACGATTCAAT
CGCGATGTGC CCGCTATCGA TGCGGCCACA CACCGACATC TCATGAACCA TAGCTGGCCG
GGAAATGTCC GCGAATTGGC ACATTTTGCC GACCGCGTAG CGCTTGGCGT TGCGAAACCG
GCTCACTTGC TGCAATCGAT GGTCGGCAAT CAAGAAACAC TTCCAAAACG GCTCGAGCGC
TACGAAGAAG CGCTCATCCG CGAAACGCTT GCCGCCCATA ATGGCAATGT TCAGGAAACG
ATTGAGGCGC TCGGTATTCC GCGAAAGACC TTTTACGATA AGATGCAGCG TCATGGCATC
AATCGCGCGG ACTATCGCGC CAACGGCGAT TGA
|
|---|
| Protein sequence | MMGKSPSVIL VDDDKALRRA TRQTLELAGF EVTDFPSALD ALNSVTFEYD GVVVTDVRMP
QIDGLQFFAR IKTIDPDLPV ILITGHGDIP MAVQAIQDGA YDFIAKPFAA DRLVHSIRRA
WEKRQLIVEN RALREAAENV EGDLPLIGQT PAMENLRRTL RDIADTDVDV LVAGETGSGK
EVVAQLLHNW GHRRKGNFVA LNCGALPETV IESELFGHEA GAFTGAQKKR LGRVEHASGG
TLFLDEIESM PAATQVKLLR VLEMREITPL GTNEVRPVDL RVVAAAKIDL GDPAQRGDFR
EDLYYRLNVV TLSIPPLRER RDDIPLLFAH FLTRASKRFN RDVPAIDAAT HRHLMNHSWP
GNVRELAHFA DRVALGVAKP AHLLQSMVGN QETLPKRLER YEEALIRETL AAHNGNVQET
IEALGIPRKT FYDKMQRHGI NRADYRANGD
|
|---|
| |