More than 300 homologs were found in PanDaTox collection
for query gene Psyr_3299 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007005  Psyr_3299  LuxR response regulator receiver  100 
 
 		 220 aa  440  1e-123  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal  1 
 
 
-
 
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  82.73 
 
 		 220 aa  357  9.999999999999999e-98  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  70.45 
 
 		 219 aa  311  5.999999999999999e-84  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  71.82 
 
 		 219 aa  309  2.9999999999999997e-83  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  71.82 
 
 		 219 aa  307  8e-83  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  71.82 
 
 		 219 aa  306  1.0000000000000001e-82  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  71.95 
 
 		 219 aa  306  1.0000000000000001e-82  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  58.18 
 
 		 214 aa  240  1e-62  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  46.76 
 
 		 219 aa  190  1e-47  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_008255  CHU_1317  response regulator  39.17 
 
 		 220 aa  175  4e-43  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  46.51 
 
 		 226 aa  171  5.999999999999999e-42  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  41.78 
 
 		 215 aa  166  4e-40  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  37.79 
 
 		 221 aa  162  3e-39  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  40.57 
 
 		 211 aa  161  8.000000000000001e-39  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  43.26 
 
 		 217 aa  156  2e-37  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  36.11 
 
 		 229 aa  154  8e-37  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.74 
 
 		 218 aa  150  1e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  36.07 
 
 		 216 aa  149  3e-35  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  36.24 
 
 		 216 aa  148  5e-35  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  39.25 
 
 		 215 aa  148  6e-35  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  36.87 
 
 		 212 aa  148  8e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  38.5 
 
 		 215 aa  147  9e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  36.07 
 
 		 226 aa  147  1.0000000000000001e-34  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  38.57 
 
 		 218 aa  147  1.0000000000000001e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  37.04 
 
 		 216 aa  147  1.0000000000000001e-34  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  38.36 
 
 		 216 aa  145  4.0000000000000006e-34  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  35.32 
 
 		 218 aa  145  4.0000000000000006e-34  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  35.71 
 
 		 215 aa  145  5e-34  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  37.73 
 
 		 221 aa  144  1e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  34.88 
 
 		 223 aa  142  3e-33  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  37.33 
 
 		 218 aa  142  4e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  37.33 
 
 		 218 aa  142  4e-33  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  37.33 
 
 		 218 aa  141  7e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  34.91 
 
 		 217 aa  141  9.999999999999999e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  37.38 
 
 		 208 aa  140  9.999999999999999e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  33.66 
 
 		 215 aa  139  3e-32  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  35.94 
 
 		 210 aa  138  6e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  34.72 
 
 		 218 aa  137  1e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  31.22 
 
 		 242 aa  136  2e-31  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  36.32 
 
 		 214 aa  137  2e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  33.95 
 
 		 253 aa  136  2e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  32.87 
 
 		 264 aa  136  3.0000000000000003e-31  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  33.18 
 
 		 222 aa  136  3.0000000000000003e-31  Caulobacter sp. K31  Bacteria  normal  0.120511  normal  1 
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  38.16 
 
 		 214 aa  135  4e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  35.85 
 
 		 213 aa  135  5e-31  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  32.11 
 
 		 225 aa  135  5e-31  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  35.38 
 
 		 212 aa  135  6.0000000000000005e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_4229  two component LuxR family transcriptional regulator  40.28 
 
 		 219 aa  135  6.0000000000000005e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.720334  normal  0.28913 
 
 
-
 
NC_013037  Dfer_2055  two component transcriptional regulator, LuxR family  31.36 
 
 		 220 aa  135  7.000000000000001e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  38.39 
 
 		 214 aa  135  7.000000000000001e-31  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  34.27 
 
 		 223 aa  134  8e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  36.62 
 
 		 215 aa  134  9.999999999999999e-31  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  32.72 
 
 		 232 aa  134  9.999999999999999e-31  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  34.26 
 
 		 210 aa  134  9.999999999999999e-31  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  34.26 
 
 		 210 aa  134  9.999999999999999e-31  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  33.8 
 
 		 210 aa  133  1.9999999999999998e-30  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  33.8 
 
 		 210 aa  133  1.9999999999999998e-30  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  33.8 
 
 		 210 aa  133  1.9999999999999998e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  34.26 
 
 		 210 aa  133  1.9999999999999998e-30  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  31.65 
 
 		 217 aa  133  1.9999999999999998e-30  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  33.8 
 
 		 210 aa  133  1.9999999999999998e-30  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  33.8 
 
 		 210 aa  133  1.9999999999999998e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  33.8 
 
 		 210 aa  133  1.9999999999999998e-30  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  34.91 
 
 		 210 aa  133  1.9999999999999998e-30  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal  1 
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  34.91 
 
 		 210 aa  133  1.9999999999999998e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  32.71 
 
 		 210 aa  133  1.9999999999999998e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  34.91 
 
 		 210 aa  133  1.9999999999999998e-30  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  36.15 
 
 		 215 aa  132  3e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  36.15 
 
 		 215 aa  132  3e-30  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  36.15 
 
 		 215 aa  132  3e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  36.15 
 
 		 215 aa  132  3e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  36.32 
 
 		 215 aa  132  3e-30  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  36.15 
 
 		 215 aa  132  3e-30  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  36.15 
 
 		 215 aa  132  3e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  33.96 
 
 		 213 aa  132  5e-30  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  31.05 
 
 		 221 aa  132  5e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  33.8 
 
 		 210 aa  132  5e-30  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  33.82 
 
 		 238 aa  131  6e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35.05 
 
 		 213 aa  131  6.999999999999999e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  34.72 
 
 		 214 aa  131  6.999999999999999e-30  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  36.23 
 
 		 215 aa  131  6.999999999999999e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  36.02 
 
 		 219 aa  130  2.0000000000000002e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  33.79 
 
 		 215 aa  130  2.0000000000000002e-29  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  31.8 
 
 		 232 aa  130  2.0000000000000002e-29  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  30.41 
 
 		 224 aa  129  3e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  34.65 
 
 		 220 aa  129  4.0000000000000003e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  35.51 
 
 		 213 aa  128  6e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  34.43 
 
 		 233 aa  128  6e-29  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  30.09 
 
 		 214 aa  128  6e-29  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  33.64 
 
 		 209 aa  128  7.000000000000001e-29  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  33.64 
 
 		 209 aa  128  7.000000000000001e-29  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_1102  LuxR family DNA-binding response regulator  30.14 
 
 		 214 aa  128  9.000000000000001e-29  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  35.5 
 
 		 215 aa  127  1.0000000000000001e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  37.38 
 
 		 212 aa  127  1.0000000000000001e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  35.87 
 
 		 244 aa  127  1.0000000000000001e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  34.88 
 
 		 225 aa  127  1.0000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_010717  PXO_06170  response regulator  38.28 
 
 		 210 aa  126  2.0000000000000002e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.624626  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  30.59 
 
 		 214 aa  126  2.0000000000000002e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_00996  response regulator  38.28 
 
 		 210 aa  126  2.0000000000000002e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  35.55 
 
 		 214 aa  127  2.0000000000000002e-28  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
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