More than 300 homologs were found in PanDaTox collection
for query gene Noca_1263 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_1263  response regulator receiver  100 
 
 
282 aa  543  1e-153  Nocardioides sp. JS614  Bacteria  normal  0.0593741  n/a   
 
 
-
 
NC_013131  Caci_4163  putative PAS/PAC sensor protein  41.98 
 
 
1039 aa  91.7  1e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0226672 
 
 
-
 
NC_007777  Francci3_0918  putative serine/threonine kinase anti-sigma factor  45.16 
 
 
142 aa  88.2  1e-16  Frankia sp. CcI3  Bacteria  normal  0.283269  normal 
 
 
-
 
NC_013510  Tcur_2643  protein serine phosphatase with GAF(s) sensor(s)  45.79 
 
 
688 aa  86.7  4e-16  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000425716  n/a   
 
 
-
 
NC_012034  Athe_1771  response regulator receiver protein  40.52 
 
 
117 aa  84.3  0.000000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  34.18 
 
 
213 aa  80.9  0.00000000000002  Opitutus terrae PB90-1  Bacteria  normal  normal  0.226192 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  36.81 
 
 
222 aa  80.5  0.00000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_009921  Franean1_5624  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.52 
 
 
143 aa  80.5  0.00000000000003  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.000415643  normal 
 
 
-
 
NC_013131  Caci_5311  protein serine phosphatase with GAF(s) sensor(s)  38.98 
 
 
952 aa  79  0.00000000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0980  nitrate/nitrite response regulator transcription regulator protein  40.71 
 
 
222 aa  78.2  0.0000000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6003  protein serine phosphatase with GAF(s) sensor(s)  37.91 
 
 
616 aa  77.8  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.697266  normal  0.4865 
 
 
-
 
NC_012034  Athe_1885  response regulator receiver protein  43.37 
 
 
1066 aa  77.4  0.0000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.166704  n/a   
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  39.64 
 
 
218 aa  77  0.0000000000003  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  42.24 
 
 
243 aa  77.4  0.0000000000003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  39.64 
 
 
218 aa  77  0.0000000000003  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal 
 
 
-
 
NC_013947  Snas_1052  protein serine phosphatase with GAF(s) sensor(s)  43.69 
 
 
655 aa  77  0.0000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.620454  normal 
 
 
-
 
NC_013595  Sros_7300  Serine phosphatase RsbU regulator of sigma subunit-like protein  41.03 
 
 
573 aa  76.3  0.0000000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0346  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.82 
 
 
122 aa  75.5  0.0000000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.108962  normal 
 
 
-
 
NC_007777  Francci3_1989  putative PAS/PAC sensor protein  42.24 
 
 
722 aa  75.9  0.0000000000008  Frankia sp. CcI3  Bacteria  normal  0.965966  normal 
 
 
-
 
NC_009664  Krad_4080  protein serine phosphatase with GAF(s) sensor(s)  40.34 
 
 
738 aa  75.5  0.0000000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32388  normal 
 
 
-
 
NC_011898  Ccel_2316  response regulator receiver protein  35.77 
 
 
121 aa  75.1  0.000000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1003  protein serine phosphatase with GAF(s) sensor(s)  37.12 
 
 
549 aa  74.7  0.000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  decreased coverage  0.00204881 
 
 
-
 
NC_009512  Pput_1131  two component LuxR family transcriptional regulator  36.43 
 
 
236 aa  73.9  0.000000000002  Pseudomonas putida F1  Bacteria  normal  0.796271  normal  0.799889 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  43.81 
 
 
207 aa  74.3  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2744  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.86 
 
 
155 aa  73.9  0.000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.813583  normal 
 
 
-
 
NC_009664  Krad_0321  response regulator receiver modulated CheB methylesterase  40.34 
 
 
419 aa  73.6  0.000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.280129  normal  0.293184 
 
 
-
 
NC_007973  Rmet_2087  two component LuxR family transcriptional regulator  39.81 
 
 
217 aa  73.6  0.000000000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.332036 
 
 
-
 
NC_009664  Krad_0104  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.07 
 
 
141 aa  73.9  0.000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.141556  normal  0.0323603 
 
 
-
 
NC_013131  Caci_0743  putative PAS/PAC sensor protein  40.83 
 
 
855 aa  73.9  0.000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565533 
 
 
-
 
NC_007796  Mhun_0126  response regulator receiver domain-containing protein  39.22 
 
 
120 aa  73.2  0.000000000004  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  29.56 
 
 
224 aa  73.6  0.000000000004  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_002947  PP_1090  LuxR family DNA-binding response regulator  38.79 
 
 
207 aa  73.2  0.000000000005  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3110  putative PAS/PAC sensor protein  40.34 
 
 
697 aa  72.8  0.000000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.63551  n/a   
 
 
-
 
NC_010322  PputGB1_4322  two component LuxR family transcriptional regulator  38.79 
 
 
207 aa  73.2  0.000000000005  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA1736  DNA-binding response regulator NarL  40.54 
 
 
233 aa  72.8  0.000000000006  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2764  DNA-binding response regulator NarL  40.54 
 
 
233 aa  72.8  0.000000000006  Burkholderia pseudomallei 1710b  Bacteria  normal  0.922757  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  33.33 
 
 
220 aa  72.8  0.000000000006  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_008785  BMASAVP1_A2246  DNA-binding response regulator NarL  40.54 
 
 
233 aa  72.8  0.000000000006  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3072  DNA-binding response regulator NarL  40.54 
 
 
233 aa  72.8  0.000000000006  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2630  nitrate/nitrite response regulator protein NarL  40.54 
 
 
233 aa  72.8  0.000000000006  Burkholderia pseudomallei 668  Bacteria  normal  0.14617  n/a   
 
 
-
 
NC_009076  BURPS1106A_2686  nitrate/nitrite response regulator protein NarL  40.54 
 
 
233 aa  72.8  0.000000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1519  DNA-binding response regulator NarL  40.54 
 
 
233 aa  72.8  0.000000000006  Burkholderia mallei NCTC 10247  Bacteria  normal  0.281442  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  32.84 
 
 
224 aa  72.8  0.000000000006  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  39.66 
 
 
218 aa  72.8  0.000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_2015  two component transcriptional regulator, LuxR family  37.25 
 
 
219 aa  72.4  0.000000000009  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1546  response regulator receiver protein  31.93 
 
 
122 aa  71.6  0.00000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1748  chemotaxis response regulator  31.93 
 
 
122 aa  71.6  0.00000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  33.55 
 
 
258 aa  72  0.00000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_009921  Franean1_5315  protein serine phosphatase with GAF(s) sensor(s)  42.74 
 
 
750 aa  71.6  0.00000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.315721 
 
 
-
 
NC_007651  BTH_I1849  DNA-binding response regulator NarL  40.54 
 
 
233 aa  72  0.00000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1805  chemotaxis response regulator  31.93 
 
 
122 aa  71.6  0.00000000001  Bacillus cereus AH187  Bacteria  normal  0.536294  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  38.26 
 
 
232 aa  72  0.00000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013757  Gobs_4668  ATP-binding region ATPase domain protein  39.5 
 
 
148 aa  72  0.00000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_0945  response regulator receiver protein  37.25 
 
 
120 aa  71.6  0.00000000001  Methanoculleus marisnigri JR1  Archaea  normal  0.0428151  n/a   
 
 
-
 
NC_014210  Ndas_0299  two component transcriptional regulator, winged helix family  45.63 
 
 
231 aa  71.2  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.867846 
 
 
-
 
NC_013595  Sros_8367  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.59 
 
 
251 aa  70.9  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_2019  response regulator receiver protein  38.24 
 
 
123 aa  71.2  0.00000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5093  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.24 
 
 
132 aa  71.2  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.738847  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  37.96 
 
 
217 aa  71.6  0.00000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_007410  Ava_B0209  two component LuxR family transcriptional regulator  35.71 
 
 
223 aa  71.6  0.00000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3651  chemotaxis response regulator  31.93 
 
 
122 aa  70.9  0.00000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  41.86 
 
 
406 aa  70.9  0.00000000002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1695  chemotaxis response regulator  31.93 
 
 
122 aa  70.9  0.00000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  41.35 
 
 
217 aa  71.2  0.00000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  31.94 
 
 
224 aa  70.9  0.00000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  32.09 
 
 
224 aa  70.5  0.00000000003  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  32.09 
 
 
224 aa  70.5  0.00000000003  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1541  chemotaxis response regulator  31.93 
 
 
122 aa  70.5  0.00000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  33.57 
 
 
220 aa  70.5  0.00000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_005957  BT9727_1517  chemotaxis protein cheY  31.93 
 
 
122 aa  70.5  0.00000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1506  chemotaxis protein  31.93 
 
 
122 aa  70.5  0.00000000003  Bacillus cereus E33L  Bacteria  normal  0.161419  n/a   
 
 
-
 
NC_011773  BCAH820_1727  chemotaxis response regulator  31.93 
 
 
122 aa  70.5  0.00000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  35.59 
 
 
219 aa  70.5  0.00000000003  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_007530  GBAA_1660  chemotaxis response regulator  31.93 
 
 
122 aa  70.5  0.00000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.241918  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  41.38 
 
 
207 aa  70.5  0.00000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33.06 
 
 
216 aa  70.5  0.00000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  43.48 
 
 
232 aa  70.1  0.00000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_010501  PputW619_1119  two component LuxR family transcriptional regulator  37.07 
 
 
208 aa  70.1  0.00000000004  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  32.58 
 
 
220 aa  70.1  0.00000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  37.5 
 
 
213 aa  70.1  0.00000000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  36.75 
 
 
231 aa  69.7  0.00000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  31.29 
 
 
215 aa  69.7  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  41.51 
 
 
222 aa  69.7  0.00000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  33.62 
 
 
218 aa  69.7  0.00000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  40.34 
 
 
225 aa  69.7  0.00000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  36.13 
 
 
212 aa  69.7  0.00000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3236  putative anti-sigma regulatory factor, serine/threonine protein kinase  44.94 
 
 
137 aa  69.3  0.00000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  31.28 
 
 
214 aa  69.3  0.00000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  38.46 
 
 
221 aa  69.3  0.00000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.685529 
 
 
-
 
NC_007492  Pfl01_4515  two component LuxR family transcriptional regulator  37.07 
 
 
208 aa  69.3  0.00000000007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00786387 
 
 
-
 
NC_011832  Mpal_1858  response regulator receiver protein  37.25 
 
 
120 aa  69.3  0.00000000007  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009921  Franean1_2634  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.06 
 
 
227 aa  69.3  0.00000000007  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1262  PAS/PAC sensor hybrid histidine kinase  44.44 
 
 
655 aa  69.3  0.00000000007  Nocardioides sp. JS614  Bacteria  normal  0.748554  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  30.83 
 
 
235 aa  68.9  0.00000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_009656  PSPA7_1160  putative two-component response regulator  36.52 
 
 
209 aa  68.9  0.00000000009  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0122525  n/a   
 
 
-
 
NC_009664  Krad_0233  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.35 
 
 
347 aa  68.9  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.211721  hitchhiker  0.0066599 
 
 
-
 
NC_007974  Rmet_5714  two component LuxR family transcriptional regulator  37.29 
 
 
210 aa  68.2  0.0000000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2486  transcriptional regulator NarP  33.03 
 
 
215 aa  68.6  0.0000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.187807  normal  0.0115945 
 
 
-
 
NC_009712  Mboo_1338  response regulator receiver protein  35.64 
 
 
120 aa  68.2  0.0000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.376219 
 
 
-
 
NC_011080  SNSL254_A2430  transcriptional regulator NarP  33.03 
 
 
215 aa  68.2  0.0000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.426027  normal  0.504703 
 
 
-
 
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