| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1262 |
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| Symbol | |
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| ID | 4599258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1335593 |
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| End bp | 1337560 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639775856 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_922463 |
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| Protein GI | 119715498 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase
[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.748554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGAGG AACTGGGGTC GGATCCGGGT GGATCGGGCC GGCGTCCGAC GATCGTGATC
GTCGACGACG CCGCCGACGT CCGCACGCTG GTCCGCAGCC GGTTGCGCCT CTCCGGCCGG
CTCGAGGTGG TCGGCGAGGG GTCGACCGGC GTCGAGGCGG TCGACGCGGC CCGGCGGCAC
CGGCCGGACC TACTGCTCCT CGACGTCTCG ATGCCGGAGA TGGACGGCCT GGTCGCCCTG
CCCCTGATCC TCGACGTCTC GCCCGGGACC CGGGTGGCGA TGTACAGCGG CTTCTCCGAG
GACGGCCTGG CGCACCGGGC GGTCGCGCTG GGGGCCGCCG CCTTCCTGGA GAAGTCCACG
CCGCTGGAGA GGCTGGTCGA CCAGCTGGTG GCGCTGCTCG ACGCCGGGCC CGTCGCCCCG
GTCGAGCGCA GCGGCCCCGA GGTCGACGAG CGGGACCGCA CGGTCCTGCA CGAGCACCAG
GAGCGGTTCC GCGAGGTCTT CGACGACGCG GCCATCGGCA TGGCCACGGT CACCCTGGCC
GGACAGGTGG TCCGCGCCAA CGCCGCGCTG GCCGCGCTCC TCGGCCGCCG CGTCGAGAGC
CTGGTCGGGC TTCCGTACGC CGACCTCACC GGCGGCCGCG CCGACCTCGT CGCCGACGCC
CTGGCCCAGA TCCTCGACGG CCGCAGCCGG GTCGTGCAGC TCGAGCACGA CGTCACGGGC
GCGACCCCGC CGCGCCGGGT GATGGCGACG GTCGCCCCGG TCCTGGACAG CAACGGCCGG
CCGCTCTACC TGTTCTGGCA GGTCCAGGAC GTCACGGCCC AGCGTGCGGC CGAGGAGGAG
CTGCGCCGCA GCGAGGCACG GTTCCGGCTG CTGGTGGAGA ACGTCGAGGA CTACGCGATC
TTCATGCTCT CCCCGGAAGG GCTCGTGGAG AGCTGGAACG CCGGGGCCCA GCGGATCAAG
GGCTACACCG CGAGCGAGAT CGTCGGCCGG CACTTCCGCA CCTTCTACCC GCCCGAGGTG
CAGGAGGCCC GGCACCCCGA GCACGAGCTC GAGCTCGCGC TGCGCGACGG CCACTACGAG
GAGGAGGGCT GGCGGGTCCG CAAGGACGGC GGCCGGTTCT GGGCCAACGT GCTGATCACC
GCCGTCCACG ACCAGACGGG CCGGCACATC GGCTTCGCGA AGATCACCCG GGACAACACC
GAGCGACGCG AGATGCTCGA GGGCCGCGAG GCCGCCGCCG GCGCGCTCGC CGAGGCCAAC
GCCCAGCTCC AGCAGGCGGC CGAGGACCAG GCCCACTTCC TCGCCGTGAC TGCGCACGAG
CTGCGCACTC CCGTCGGCGT CCTCGCCGGC ACGGCGGAGA TGCTGGCCGC GCACGCCGAC
GAGCTCGACG CCGAGGAGCG GCACGAGCTG CTCGAGGGCA TGGGCTCCAG CGCCGCCCGG
CTCCGCCGCC TGCTCGCCGA CCTGCTGACC GCCTCCCGCC TCCAGGCCAG CGCCCTCGAG
CTCGACGTCG AGACCGTCGA CGTCGGTGCC CTTCTCGACA CCGCGGCCGC GGCCGCCCGT
CGCGCCCACC CGGGCGCGGA GATCGAGGCC ACCGCCGAGC CCGGGCTCCT GGTCGAGGGC
GACCGCGACC GGCTCGGGCA GGCCGTGGAC AACTTGGTCG CCAACGCCCT GCGCCACGGG
AGCCCGCCGG TGCTGGTGTG GGCCCGGGCG GCGGGCACCG ACCCGGACAC GGTCGAGATC
GAGGTCCGCG ACGCCGGGCC GGGGGTCAGC GAGGAGATGC GCGAGCGGCT CTTCGACCGG
TTCGCGACCG GTCGCAGCGG CGGTGGGACC GGTCTCGGGC TCTACATCGT GCGCCAGCTG
GCCCGCTCCC ACGACGGGGA GGCGACGTAC CGTCCCGGTG GCGCCGACGG CACCGGCGGC
TCGTTCGTGC TCACCCTGCC GCGCTCGGGT GCCGATGCGC TCGGCTGA
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| Protein sequence | MGEELGSDPG GSGRRPTIVI VDDAADVRTL VRSRLRLSGR LEVVGEGSTG VEAVDAARRH
RPDLLLLDVS MPEMDGLVAL PLILDVSPGT RVAMYSGFSE DGLAHRAVAL GAAAFLEKST
PLERLVDQLV ALLDAGPVAP VERSGPEVDE RDRTVLHEHQ ERFREVFDDA AIGMATVTLA
GQVVRANAAL AALLGRRVES LVGLPYADLT GGRADLVADA LAQILDGRSR VVQLEHDVTG
ATPPRRVMAT VAPVLDSNGR PLYLFWQVQD VTAQRAAEEE LRRSEARFRL LVENVEDYAI
FMLSPEGLVE SWNAGAQRIK GYTASEIVGR HFRTFYPPEV QEARHPEHEL ELALRDGHYE
EEGWRVRKDG GRFWANVLIT AVHDQTGRHI GFAKITRDNT ERREMLEGRE AAAGALAEAN
AQLQQAAEDQ AHFLAVTAHE LRTPVGVLAG TAEMLAAHAD ELDAEERHEL LEGMGSSAAR
LRRLLADLLT ASRLQASALE LDVETVDVGA LLDTAAAAAR RAHPGAEIEA TAEPGLLVEG
DRDRLGQAVD NLVANALRHG SPPVLVWARA AGTDPDTVEI EVRDAGPGVS EEMRERLFDR
FATGRSGGGT GLGLYIVRQL ARSHDGEATY RPGGADGTGG SFVLTLPRSG ADALG
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