Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1052 |
Symbol | |
ID | 8882237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1113324 |
End bp | 1115291 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | protein serine phosphatase with GAF(s) sensor(s) |
Protein accession | YP_003509855 |
Protein GI | 291298577 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.620454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTGCGCG AGGTGCTCGC CGAAGTCGGC CTCACCGACC TCATGGACGA GGCCCTGCTA CTCACCACCG AGTTGGCCAC CAACGGTGTC ATTCATGCCG GGACCGATCT CGACGTCAAC GTCGCGGCGG ATGACCGCGG GGTCACCGTA ACCGTAACCG ACTTCCGGTC CGGTCCGATA GGTCCCGCCA CGCCGGTTCC GCCCGACGAG GGCGCCGAGC ACGGTCGCGG CCTGCTGCTG GTCGACCAGT TCGCCTCCTC GTGGGGCATC AGCCACGATC CCGACGGCAA GGGCGTCTGG TTCCGGCTGG AGGTGCCCTC CACCGCGGCC CGGGCCCTGA CCGGCGAGAA ACGCGGCGAC GCGCCCGCCG TGGTCACCGA GGTGCCCGAG GACGACGTCG CGGCCATCGC CCGCACCGCC GAGCGGGTCT CGTGGCTGAT CCACATCGGA GACGAACTGC GGACCAAGCT GACCCTGCCG CAGCTGATCT CGGAGATGCT GCTGCGGCTG TGCGAGGTGA TCGGGGCGCC CGGCGGCGTG GTCTACCTCG ACACCGCCGA CGGCTCCGGC CCGGCCGTGG TCGCCAAACA CGGCAACATC ACCTCCGGCG ACACCATGGT CTCGGTCGCG CTTCCGGTGC ACCGGCCCTA TTCCGGACGG GTCGAGCTGT TCCCCGACTC CGACCCGCCT CCATACTGGA CTTCACTGGC GGCGCTGTCG GCCGACCGGA TGGCGCTGGC CATCGAGACC GACCGGGTCA CCGGCTCCGA CCGCCGCCGT CGCGGCTGGC TGACCTTCCT GGCCGAGGCC GGGGAACTGC TGGCGCAGTC GCTGGACGTC AACCTCACCC TGGCGCTGGT ACCGCAGATC ATGGTCCCCC GGCTGGGCGA GTGGTGCGCC GTCCACACCG TCGACGAGTG GGGCAACACC GAACTGGCCG CCGCCGTCCA CGCCTCGGAG TCCTCGCTGC CGAGGCTGCG GCAACGCCTG GCCGAGCCCG AACTGGCGGC CCGGATCCGC GGCGTCGACG TGCACGCGGG CGCGGTGCCG CTGCCGCCGC CCGCCGAGGG CGTCGTCATC CCGCTGGTCG CGCGCGGCAC CGTCCTGGGC GTGCTGGCGG TGGGCCGTCC CGTCGGTCGC ACCCACTCCC GCGACGACAT CACGATCCTG GAGGACGCGG CCCGCCGCGC CGCCCTGGCC ATCGACAACG CCCGCATCCA CTCCGAACGC GCCGAGATCG CCCGCGACTT CCAGCAGTCG CTGCTGCCCT CGGCGCTGCC GAAGGCCAAG GGCCTGGCCT TCGCCGCCGA GTACATCCCG GCCGCCACCG GCACCGAGGT CGACGGCGAC TTCTACGACG TCCTGGAACT GGAGGGCGGC GGCTACTTCG TGTCCATCGG CGACGTGTGC GGCAAGGGCG CCCGGGCCGG AGCCGTCACC GGGCTGGTGC GCGACGTCCT GCGGGTCATG ACCCGCGACC ACCGGCCGCT GCCGCGCACC CTGGAACTGC TCAACCAGAC GCTGCTGGAA CAGTCCACAG AGGGCCGATA CGCGACCCTG GCCACCGCGA CGGTGACCCG AGACGACGCC AACCTCGACA TCGAGCTGGT CCTGTCCGGA CACGAACGCC CGCTGCTGTT GCACCGCGAG GGCAAGTGCG AGTACGTCGG CGCGCTGGGC ACCGCCGTCG GGCTGCTGCC CAAGCTCGCG GTCAATCCGG TCAAGTGCAC GCTGCTGCCC GGCGACGCCC TGGTGTTCTA CACCGACGGC GTCACCGAAC GCCGCGACGG CTCCAAGCTG TTCGGCCACG CCAACATCTG CCGGTCCCTG CGTCCGCTGG CCGGATACCC GGCCAATGTC ATCGCCGCCA AGCTGCGCAG CGCCGTCATC AACTACTCCG ATGAGGACCC CCGCGACGAC ATGGCCGTCC TGGTACTGGC AAACGAGGCG CCGCTGTCCG GCGGTTAG
|
Protein sequence | MVREVLAEVG LTDLMDEALL LTTELATNGV IHAGTDLDVN VAADDRGVTV TVTDFRSGPI GPATPVPPDE GAEHGRGLLL VDQFASSWGI SHDPDGKGVW FRLEVPSTAA RALTGEKRGD APAVVTEVPE DDVAAIARTA ERVSWLIHIG DELRTKLTLP QLISEMLLRL CEVIGAPGGV VYLDTADGSG PAVVAKHGNI TSGDTMVSVA LPVHRPYSGR VELFPDSDPP PYWTSLAALS ADRMALAIET DRVTGSDRRR RGWLTFLAEA GELLAQSLDV NLTLALVPQI MVPRLGEWCA VHTVDEWGNT ELAAAVHASE SSLPRLRQRL AEPELAARIR GVDVHAGAVP LPPPAEGVVI PLVARGTVLG VLAVGRPVGR THSRDDITIL EDAARRAALA IDNARIHSER AEIARDFQQS LLPSALPKAK GLAFAAEYIP AATGTEVDGD FYDVLELEGG GYFVSIGDVC GKGARAGAVT GLVRDVLRVM TRDHRPLPRT LELLNQTLLE QSTEGRYATL ATATVTRDDA NLDIELVLSG HERPLLLHRE GKCEYVGALG TAVGLLPKLA VNPVKCTLLP GDALVFYTDG VTERRDGSKL FGHANICRSL RPLAGYPANV IAAKLRSAVI NYSDEDPRDD MAVLVLANEA PLSGG
|
| |