Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5315 |
Symbol | |
ID | 5673649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6400668 |
End bp | 6402920 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641244172 |
Product | protein serine phosphatase with GAF(s) sensor(s) |
Protein accession | YP_001509579 |
Protein GI | 158317071 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.315721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAAC GTCCCCTCGG CGCCGCGGCC GATCCGGTCG AGGCGTCCGG ACCGGCGCCG GCCGGGCGGG CGACGTCCGG GCGGGCGACG CACGGATGGG AGAGTCGAGG CCCGGTGATC GACACGGAGT CCCGCTCGGT GGGCTGGGCC GCCACGACGG CCATGGTTGG CCGCGCCATC GTCCGCGAGC TGTCGAGTAC CCGGCGCCGG CGCCGCGTGC ACGTCACCGA GGAGGCGACG TTCGAGCAGC TGTCGTTCCT CGCCGACGCG AGCCTGGTCC TGAGCAGCTC GCTCGACCCG CAGCGGATCA TCGACATGAT CGCATCCCTG GTTGTGCCCC GGATGGGCGA CGCGGCCGTG GTCTGGCTTC GCGGCGACGG GGACAGCATT CGGATCGCCG GGTCGCGCTT TCTCGACCCG AAGACGGCGG ACTTCGTCCG GGCCGTCGTC CAGATCCACC CGCCGACAGC CACCGAGGAC ATCCCGCCGG GCGTCGTCGT CCGGACCGGC CAGTCGTACT ACGTGCCCCG CTACACCGAG GACGTCGTCC GCCGACTGTT CCCCGGCGAG GCCGTTGAGC GGTTCGGGGA GATCCAGGCA GGCGCCGCGA TCACCGTGCC GATGTACGCC CGGGGGAGGG TGTTCGGCGC GCTGACGGTC GGCCGGCGCG AATCCGTCGA GTACACCGCG CTCGACATCC GCCTCATCGA GGAGCTGGCC CGGCGCGGCG GCACCGCGCT CGACAACGCG CAGCTCTTCC GGGACGTCGA GGAGTCCGCG CTGACACTGC AGCGCTCGAT GCTTCCCGCG CACCCGCCGG CCCTGGACGG CATGGAGATC GCGATGGAGT ACCGGCCCGG CACGGCCGGT ACGGAGGTCG GCGGGGACCT CTACGACGTC ATCCCGCTGC CCGGCGGGCG GGTCGGCGTG GCGATCGGTG ACGTGATGGG CCGTGGCCTG CACGCGGCCG CGGTGATGGG CCAGCTGCGG GCCGCACTGC GGGCGTACGC GCTGGAGGAC TGGGGACCCG CCGAGCTGCT GGCCCGGCTC GACCGGGTTG TCGACTCGCT GCCCGGCCTG CAGATGGCCA CCTCCATGTA CGCGGTGTAC GACCCCTACT CCGGCCGGAT GACGATCGCG AGCGCGGGCC ATCCGCCGCC GCTGTTGCTG CTGCCCGACG AGGAGCCGGA CTACCTCGTT CTCGAGCCCG GGCTCCCGCT CGGGACGGGT GAGCAGGGCA CCTTCTCCGA GCTGACCGTC TCGCTCCCGT CCGGCTCGGC GTTCGTGATG TTCACCGACG GCCTGGTGGA ATCCCGGCGC CGGCCGCTCG CGGACGGCCT GGAGCACCTG AGGTCGGGCC TGGGCGAGCA GATCGCCCGT CCGCGCGCCG TTCGGGCGTT CGCGCCGCCT TCGGGTGATC CGTCTGTGGG CGCGGCGCCT GCCACGGGTG ATCCGCCCGT GGGCGCGGCG CCTGCCACAG GTGATCCGCC CGTGGGCGCG GCGCCCGCCG CGGGTGATCC GCCCGCGGCC GTCGTGGCAC TGGCGGCCTC CGCGCCGGCC GCCGCGGCTG GCGGAGCCAT GGTCACGCCG GAGCGGCGGA TCAGAGAGCG GCGGTCGGGC CGGGACCGCC GCGGGGGCTA CCGCAGGACG CGGGCGAGCG GTGACCGCCG CCGCACCGGC GGTGGCTTCG CGGCCCGCAG CTGGTCCGGC CCGGACGCGG TGAGCGGCAG CGGATCGGGC CCGAGCGAGG AGACCGCCCG GACCCTGCTC GAGCGCTGCC TGCTGGCCGC GGATCTCCCG CCGCGCACGG ACGACGACAT AGCGCTGCTC GCGCTGGTCA CCCGGCAGCT GCGCCCGCCG CTGCTCCAGC TCGCGCTGCC CGCCGTCGCC GCATCGGCCG GACAGGCCCG CACGGCCGTC CGGCGCTCGC TGCTCGACGC CGGGATCGGA TCACTCGACG ACGCGATTCT GCTGGTCAGC GAGGTGGTCA CCAACGCGGT GCTGCACGCG CGCAGCGATC TCGTGCTGCG GGCCACCCTG GAACCCGGGC GGCTGCGGGT GAGCGTCGAG GACAGGGAGG GCACCGCCCT GCCCCGGCCC GGCGGCAACT CCCCGGACGA TCCGGAGGCC GAGCACGGCT GGGGCCTGCT CCTCGTCGAG GCGCTCGCGC AGGCCTGGGG AGTCGAGACG ACACCGGACG GCAAGCGGGT CTGGTTCGAG ATGGAGATCC CCGACGAGGC CGACCACACC TGA
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Protein sequence | MAKRPLGAAA DPVEASGPAP AGRATSGRAT HGWESRGPVI DTESRSVGWA ATTAMVGRAI VRELSSTRRR RRVHVTEEAT FEQLSFLADA SLVLSSSLDP QRIIDMIASL VVPRMGDAAV VWLRGDGDSI RIAGSRFLDP KTADFVRAVV QIHPPTATED IPPGVVVRTG QSYYVPRYTE DVVRRLFPGE AVERFGEIQA GAAITVPMYA RGRVFGALTV GRRESVEYTA LDIRLIEELA RRGGTALDNA QLFRDVEESA LTLQRSMLPA HPPALDGMEI AMEYRPGTAG TEVGGDLYDV IPLPGGRVGV AIGDVMGRGL HAAAVMGQLR AALRAYALED WGPAELLARL DRVVDSLPGL QMATSMYAVY DPYSGRMTIA SAGHPPPLLL LPDEEPDYLV LEPGLPLGTG EQGTFSELTV SLPSGSAFVM FTDGLVESRR RPLADGLEHL RSGLGEQIAR PRAVRAFAPP SGDPSVGAAP ATGDPPVGAA PATGDPPVGA APAAGDPPAA VVALAASAPA AAAGGAMVTP ERRIRERRSG RDRRGGYRRT RASGDRRRTG GGFAARSWSG PDAVSGSGSG PSEETARTLL ERCLLAADLP PRTDDDIALL ALVTRQLRPP LLQLALPAVA ASAGQARTAV RRSLLDAGIG SLDDAILLVS EVVTNAVLHA RSDLVLRATL EPGRLRVSVE DREGTALPRP GGNSPDDPEA EHGWGLLLVE ALAQAWGVET TPDGKRVWFE MEIPDEADHT
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