| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6003 |
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| Symbol | |
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| ID | 8337366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6923738 |
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| End bp | 6925588 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959107 |
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| Product | protein serine phosphatase with GAF(s) sensor(s) |
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| Protein accession | YP_003116701 |
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| Protein GI | 256395137 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.697266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.4865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCGGA CAGTGGTGGG ACAAGCCGCC ACTCCCTTTT CCGGAACACT CGGCGCCCCG
GAAGCGGGCA CGGCGGGAGT CGGAGGTGAC AAGCGCACCC CCCGGCACGC CGCGCCACCG
CACGACTGGC ACGACACGGC CGATTCGGTG CGCCTGCGAC TGGCGCTGCT GAACCGGGCC
AGCGAGGAGA TCGGCACCAC CCTGGATCTG GTGCGCACGG CCGAGGAACT GGTCGCGATC
GCCATCCCCG ACTTCGCCGA CACCACCTGG GTGCTGCTGC AGGAGCGGGT CGCCACCCAC
CACGAGATCC CGGCGCCGTT CAAGGACGGC GGCGCACGCG TGCGCCGGCT GGCCCTCGGC
GTGTCGGACA AGGACCCGCT GCCGGTGGAG TTCTGGTTGT CCACACTGCC GATCGGGGAG
ACCGCGGTGT GCCCGCCGGC CTCGCCGTTC GCGCGCTGCA TGGCCGAGCG GCGCTCGCTG
TTCTTCCCGA TCGTCCCGGA GGAGCTGGCC GGACGCACCG CCGAGGACTT CGGACGTCCG
GACTTCTACC GCGCCATGGC GGGACGCTCG CTGCTTCTCA GCCCTCTGAT GGCGCGCGGC
CGGGTCCTGG GACTGCTGGC GTTCAACCGC GACCCCGCCG AGCGCGCGGA GTTCTGCGGC
CGGGACGTGG AGCTGGCGGA CAACCTGGCG CGGCGCACGG CGCTGTGCAT CGACAACGCG
CGGCTGTACA ACCTGGAGAA GTCGCAGGCG CTGACGCTGC AGAGTTCGCT GCTGCCCAAA
CGCGTGCAGC CGCCTCCCGG CATGGAGGTG GCGCACCGGT ACGTGCCCGG CAGCGACGTC
GCCGAGGTCG GCGGCGACTG GTTCGACGTG ATCCCGCTGA CCGGCGGCCG GGTGGCGCTG
GTGGTCGGGG ACGTGATGGG GCACGGGATG CAGGCGGCCA CGGTGATGGG GCAGCTGCGC
ACCGCGGTGC GGACGCTGGC CCGCCTGGAG CTGCCGGTGA CCGAGCTGAT GGGGCATCTG
GACGCGCTGC TGCCGGACAT GGCGGACAGC TATCTGTTCG CCACGTGCAT CATCGCGGTG
CACGACCCGG AGGCGCGCAC GTGCGAGATC GTGCGCGCCG GGCACGTGCC GCCGGTGATC
GTGCACCCGG ATCCGTCGGT GAAGCCGCGG ATAGAGGACG TGCCGGCGAA CCGCCCGCTG
GGACTGGGGT TCGTGTCGGA CCCGTTCGAG TCCTGGACGC TGGACCTACC GGAGGGCTCG
CTGCTGGTGC TGTGCACGGA CGGTCTGGTC GAATCGAAGA ACCGCGACAT CGGAGACGGA
TTACAACTGT TGCTGGACAA CCTGGGCGAC CCCGAGACCG GCCTGGAAGA GATCTGCGAC
ACCCTGACCC GCACGCTGGC GATGGAGGGC GACCGGGACG ACCTGGCGCT GCTGGTGGCC
CGGATCGGGC GCGCGCCGTC GCGCTCGGCG TCCTGGGAGC TGCCGGCGGA GTCCTACGCG
GTGCGCGAGG CGCGGCACTT CGTGCGGCAG CAGGCCGGGT CCTGGGGACT GCCGGAGGAC
ACCGTGGACA CCGCCGAGCT GCTGGTGAGC GAGCTGGCGA CGAACGCGGT GCGGCACGCC
GCCGGACCGG GCCCGATCGA GATCCGGCTG TCTTATGACG ATCGCCTGAC GTGCGAGGTC
GCCGACCAGG TCGGCGCGGA GCCGCGGCCG GCGGCGCTGC CGGACGACCT GGAGGAGAGC
GGTCGCGGGC TGTTCCTGGT CAGCGAACTG TCCGCGGACT GGGGGTCGCG GCGGACGTCG
ACGGGGAAGG TCGTGTGGTT CGCGTTGGAG GGGTTGGGGG TCGCGGCTTA G
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| Protein sequence | MDRTVVGQAA TPFSGTLGAP EAGTAGVGGD KRTPRHAAPP HDWHDTADSV RLRLALLNRA
SEEIGTTLDL VRTAEELVAI AIPDFADTTW VLLQERVATH HEIPAPFKDG GARVRRLALG
VSDKDPLPVE FWLSTLPIGE TAVCPPASPF ARCMAERRSL FFPIVPEELA GRTAEDFGRP
DFYRAMAGRS LLLSPLMARG RVLGLLAFNR DPAERAEFCG RDVELADNLA RRTALCIDNA
RLYNLEKSQA LTLQSSLLPK RVQPPPGMEV AHRYVPGSDV AEVGGDWFDV IPLTGGRVAL
VVGDVMGHGM QAATVMGQLR TAVRTLARLE LPVTELMGHL DALLPDMADS YLFATCIIAV
HDPEARTCEI VRAGHVPPVI VHPDPSVKPR IEDVPANRPL GLGFVSDPFE SWTLDLPEGS
LLVLCTDGLV ESKNRDIGDG LQLLLDNLGD PETGLEEICD TLTRTLAMEG DRDDLALLVA
RIGRAPSRSA SWELPAESYA VREARHFVRQ QAGSWGLPED TVDTAELLVS ELATNAVRHA
AGPGPIEIRL SYDDRLTCEV ADQVGAEPRP AALPDDLEES GRGLFLVSEL SADWGSRRTS
TGKVVWFALE GLGVAA
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