| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3236 |
|---|
| Symbol | |
|---|
| ID | 8327426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3772998 |
|---|
| End bp | 3773411 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644943749 |
|---|
| Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
|---|
| Protein accession | YP_003100989 |
|---|
| Protein GI | 256377329 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGG TGGACGCCCC AACCACCCCA CCCACCCCGG CCGCGCTGGA CCTCACGCCC
CGCCCACCCC TGGCCGAGGT GCGCCGCTGG ACCGGCGCGC TGCTGATCGA CGCCGACGAG
GAAGCAGCGG ACGACGTGCT GCTCGTGGTC AACGAGCTGG TCGCCAACGC CTACGACCAC
ACCACCTCCC CACTCGCCCT GCGCCTCACC ACCACCCCCG AGCACGTGCG CGTGGAGGTC
GAGGACGGCT CCCCCGACCC ACCACGCCCG GACCTCACCG CGGGCCTGCG CCAGATCGGC
ACGCGCGGAC GCGGCCTGCT GCTGATCCGC CAGCTGACCG ACCGCTGGGG CAGCACGCCC
CACCCCGGCG GCAAGACCGT GTGGGCGGAG CTGCCGAACG TCCCGGCGAC CTGA
|
|---|
| Protein sequence | MDEVDAPTTP PTPAALDLTP RPPLAEVRRW TGALLIDADE EAADDVLLVV NELVANAYDH
TTSPLALRLT TTPEHVRVEV EDGSPDPPRP DLTAGLRQIG TRGRGLLLIR QLTDRWGSTP
HPGGKTVWAE LPNVPAT
|
|---|
| |