Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7300 |
Symbol | |
ID | 8670620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 8058771 |
End bp | 8060492 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Serine phosphatase RsbU regulator of sigma subunit-like protein |
Protein accession | YP_003342730 |
Protein GI | 271968534 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGCC GCTTCGTCAC CAAGGACCCC GCGGCGGCCG CACCGCGGAT GAGCAGCCCC GCCACCATGA ACGAGCAGCT CTCCCTGCTC AACGCGGCGA GCAAGCGGAT CGGCAGCACC CTGGACATGT TCGAGACCGG CAGGGAGCTG ATGGATGTCG CCGTGCCGCG CTTCGCGGAC GCGGCGGGCA TCCTGGTGCA GGACCGGCTC ATGACCGACG GGGAGTTCCC GCAGCGCAAC ACCGACGGCA CGGCGCTGGT GCGGCGGATC GCGGTCGGCG TGTCCGACCC CGCGCCCGGC GAGTACGCCA GGGCGTTCCC GGTGGACGAG GTCGTGGTCT ACGAGGCGTG GACGCCCTAC GCCAGGTGCA TGGCCACCGG CAACCCGATC CTCTATCCCC GGCTGGGGCG CCGGACCGCC GAGGAGATCG GGCGGTTCTG GCAGCGCGAC TCGGTGTCCA AGGTGCTGGA GGACAGCTCC TTCCTGGTGG TCCCGCTCAA GGCGCGCGGC CGGGTGCTGG GCTTCGTCAT CTTCACCCGC AGACCCGACA GCGAGCCCTT CGAGGAGCAG GACATCGGCC TGGCCGAGGA GCTGGCGGCC AGGACCGCGG TCTGCCTGGA CAACGCCCGG CTCTACAACC GCGAGCGCCG TACCGCGCTG ACCCTGCAGA GCAGCCTGCT CCCGGCCGAC CTCTACCAGC CGCTGGGCCT GACGATCGCC TCCCGCTACC TGCCCGCGAG CGATCTGGTG GGGGTGGGCG GCGACTGGTA CGACGTGATC CCGCTGCCCG GCTGCCGGGT CGCCCTCGTG GTCGGCGACG TCATGGGGCA CGGCATCAGG GCGGCGGCCA CGATGGGCCA GCTCCGCACG GCCGCCCGCA CGCTGGCCAG TCTCGACCTC AGCCCGGCCG AGGTGCTGTT CCGGCTCAAC CGGATGAGCC AGGACCTGGA CGCCACCCAG ATCGCGACGT GTGTCTACGC CACCTACGAC CCGGTCACCC GGATCTGCGC GCTCGCCTCC GCGGGGCACG TGCCGCCGAT CCTGGTACGG CCGGGCGGCA AGCCCGAGCT GCTGGAGCTG CCGCCGGGGC TCCCCCTGGG CATCGGCAAC GAGCCGGTCG AGATGCGCGA GCTCGTCCTC CCGCACGACG CCGTCCTCGC CTTCTACACC GACGGCCTGG TGGAGAGCCG CGAGCGGGAC ATCGACGAGG GCATCGACAT GGTCTGCGAT CTGCTCGCCG GCCAGAACCG GGACCTGGAG GAGGTGTGCG ACCTCACGAT CGGCGCGCAG CGTCCGGGAC ACGAGCGCGA CGACATCGCG CTCCTGCTGG CCAGGGTGCG CGAGCTGAAC GAGGACGACA TCGTCGAGAT CGCCCTCCCG TCGGACCCCC GCTCCGCCTC CAAGGCGCGC CGCTTCATCC GGGCCACGCT GACCGAGTGG CGGCTGGACC CGATCGCCGA CGCCACCGAG CTCATGATCA GCGAGCTGGT CACCAACGCC ATCAAGCACG GCTCGGGCAC GGTCGGGCTG CGCCTGCTGC GCGGTCCCAC GCTGGTGTGC GAGGTGACCG ACCGCTCCCT CGCGATGCCG GTCATGCGCG AGGCCGGCAG CGGAGACGAC ACCGGCCGCG GGCTGCATCT CATCAACTGG CTCGCGCATC GGTGGGGCTC CCGGCTGACG CCCAAGGGCA AGGTCGTCTG GGTGGAGCAG AGCCTGCCGT GA
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Protein sequence | MNRRFVTKDP AAAAPRMSSP ATMNEQLSLL NAASKRIGST LDMFETGREL MDVAVPRFAD AAGILVQDRL MTDGEFPQRN TDGTALVRRI AVGVSDPAPG EYARAFPVDE VVVYEAWTPY ARCMATGNPI LYPRLGRRTA EEIGRFWQRD SVSKVLEDSS FLVVPLKARG RVLGFVIFTR RPDSEPFEEQ DIGLAEELAA RTAVCLDNAR LYNRERRTAL TLQSSLLPAD LYQPLGLTIA SRYLPASDLV GVGGDWYDVI PLPGCRVALV VGDVMGHGIR AAATMGQLRT AARTLASLDL SPAEVLFRLN RMSQDLDATQ IATCVYATYD PVTRICALAS AGHVPPILVR PGGKPELLEL PPGLPLGIGN EPVEMRELVL PHDAVLAFYT DGLVESRERD IDEGIDMVCD LLAGQNRDLE EVCDLTIGAQ RPGHERDDIA LLLARVRELN EDDIVEIALP SDPRSASKAR RFIRATLTEW RLDPIADATE LMISELVTNA IKHGSGTVGL RLLRGPTLVC EVTDRSLAMP VMREAGSGDD TGRGLHLINW LAHRWGSRLT PKGKVVWVEQ SLP
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