More than 300 homologs were found in PanDaTox collection
for query gene Hoch_5999 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013440  Hoch_5999  response regulator receiver protein  100 
 
 		 280 aa  561  1.0000000000000001e-159  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_1850  response regulator receiver protein  46.15 
 
 		 126 aa  90.5  3e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.549411  normal  1 
 
 
-
 
NC_009675  Anae109_3956  response regulator receiver protein  41.44 
 
 		 128 aa  89.4  6e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.314568 
 
 
-
 
NC_011145  AnaeK_1889  response regulator receiver protein  45.54 
 
 		 126 aa  89.4  6e-17  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1974  response regulator receiver protein  45.54 
 
 		 126 aa  89.4  6e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1989  response regulator receiver domain-containing protein  45.54 
 
 		 126 aa  89  9e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU2046  response regulator  38.26 
 
 		 404 aa  87.4  2e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.0829987  n/a   
 
 
-
 
NC_008009  Acid345_0488  response regulator receiver protein  43.75 
 
 		 123 aa  87.4  2e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_2145  multi-sensor hybrid histidine kinase  26.87 
 
 		 1271 aa  87.8  2e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  0.152151  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  46.15 
 
 		 462 aa  84  0.000000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_007413  Ava_4432  PAS/PAC sensor hybrid histidine kinase  28.7 
 
 		 1002 aa  84.3  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_4086  response regulator receiver protein  38.46 
 
 		 123 aa  84.3  0.000000000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0365078  n/a   
 
 
-
 
NC_007947  Mfla_1243  response regulator receiver domain-containing protein  39.83 
 
 		 121 aa  84.3  0.000000000000002  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  0.253807 
 
 
-
 
NC_004347  SO_2540  response regulator  37.17 
 
 		 192 aa  83.6  0.000000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_3975  response regulator receiver domain-containing protein  38.46 
 
 		 123 aa  83.6  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.44357  n/a   
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  39.29 
 
 		 369 aa  83.2  0.000000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_009767  Rcas_3136  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  43.52 
 
 		 919 aa  82.8  0.000000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_0828  response regulator receiver protein  38.14 
 
 		 122 aa  82.8  0.000000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.0000089442  n/a   
 
 
-
 
NC_009675  Anae109_0930  response regulator receiver protein  40 
 
 		 456 aa  82.8  0.000000000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.139996  normal  0.100238 
 
 
-
 
NC_010505  Mrad2831_2672  multi-sensor hybrid histidine kinase  30.68 
 
 		 991 aa  82.8  0.000000000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.646953  normal  1 
 
 
-
 
NC_007484  Noc_2401  phosphate regulon transcriptional regulatory protein phoB  31.31 
 
 		 229 aa  82.8  0.000000000000007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0776  response regulator receiver domain-containing protein  37.29 
 
 		 122 aa  82.4  0.000000000000007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0195762  n/a   
 
 
-
 
NC_007517  Gmet_0955  response regulator receiver domain-containing protein  36.52 
 
 		 439 aa  82.4  0.000000000000008  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2805  integral membrane sensor hybrid histidine kinase  30.6 
 
 		 927 aa  82.4  0.000000000000008  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_3548  response regulator receiver protein  38.74 
 
 		 117 aa  82.4  0.000000000000008  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.0400953 
 
 
-
 
NC_010501  PputW619_3202  response regulator receiver protein  37.84 
 
 		 117 aa  80.9  0.00000000000002  Pseudomonas putida W619  Bacteria  normal  0.529191  normal  1 
 
 
-
 
NC_014248  Aazo_0932  response regulator receiver sensor signal transduction histidine kinase  40.71 
 
 		 374 aa  80.9  0.00000000000002  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3985  response regulator receiver protein  34.81 
 
 		 125 aa  80.9  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0824  response regulator receiver protein  37.29 
 
 		 122 aa  81.3  0.00000000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0263767  n/a   
 
 
-
 
NC_009675  Anae109_0442  response regulator receiver protein  36.84 
 
 		 126 aa  80.5  0.00000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0489543  normal  1 
 
 
-
 
NC_007760  Adeh_3844  response regulator receiver domain-containing protein  36.28 
 
 		 124 aa  80.5  0.00000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_0356  response regulator receiver protein  40.35 
 
 		 121 aa  80.1  0.00000000000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0780111  normal  0.957515 
 
 
-
 
NC_011145  AnaeK_3907  response regulator receiver protein  36.28 
 
 		 125 aa  79.7  0.00000000000005  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_13280  two component transcriptional regulator, winged helix family  37.69 
 
 		 227 aa  79.3  0.00000000000006  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000536961  n/a   
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  37.74 
 
 		 231 aa  79  0.00000000000008  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_007969  Pcryo_2096  CheA signal transduction histidine kinases  37.07 
 
 		 2301 aa  79  0.00000000000009  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  37.74 
 
 		 231 aa  78.2  0.0000000000001  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_007204  Psyc_1813  putative hybrid two-component sensor and regulatory protein  37.93 
 
 		 2284 aa  78.2  0.0000000000001  Psychrobacter arcticus 273-4  Bacteria  normal  0.409027  normal  1 
 
 
-
 
NC_007347  Reut_A2623  response regulator receiver  35.34 
 
 		 160 aa  78.2  0.0000000000001  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1488  two component transcriptional regulator  36.67 
 
 		 228 aa  78.6  0.0000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00208742  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  32.35 
 
 		 235 aa  78.6  0.0000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  41.51 
 
 		 468 aa  78.6  0.0000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_009512  Pput_1937  response regulator receiver protein  37.84 
 
 		 117 aa  78.2  0.0000000000001  Pseudomonas putida F1  Bacteria  normal  0.29733  normal  1 
 
 
-
 
NC_013422  Hneap_2080  two component, sigma54 specific, transcriptional regulator, Fis family  39.47 
 
 		 461 aa  78.2  0.0000000000001  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  32.35 
 
 		 235 aa  78.2  0.0000000000001  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  32.35 
 
 		 235 aa  78.2  0.0000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  32.35 
 
 		 235 aa  78.2  0.0000000000001  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  39.17 
 
 		 461 aa  77.4  0.0000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  32.35 
 
 		 235 aa  77.8  0.0000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  32.35 
 
 		 235 aa  77.8  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  32.35 
 
 		 235 aa  77.8  0.0000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  32.35 
 
 		 235 aa  77.8  0.0000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  32.35 
 
 		 235 aa  77.8  0.0000000000002  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  35.34 
 
 		 237 aa  77.4  0.0000000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_3616  response regulator receiver Signal transduction histidine kinase  40.87 
 
 		 393 aa  77.8  0.0000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159723  normal  0.789101 
 
 
-
 
NC_009802  CCC13826_1969  response regulator receiver domain-containing protein  32.68 
 
 		 219 aa  77.4  0.0000000000002  Campylobacter concisus 13826  Bacteria  normal  0.478098  n/a   
 
 
-
 
NC_007484  Noc_0131  response regulator receiver  32.2 
 
 		 132 aa  77.8  0.0000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0905  response regulator receiver protein  33.33 
 
 		 295 aa  77.8  0.0000000000002  Meiothermus ruber DSM 1279  Bacteria  unclonable  0.00000000245258  normal  1 
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  32.35 
 
 		 235 aa  77.8  0.0000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_008312  Tery_0714  CheA signal transduction histidine kinases  38.94 
 
 		 1020 aa  77.4  0.0000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  32.35 
 
 		 235 aa  77.8  0.0000000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_009767  Rcas_0960  two component transcriptional regulator  36.67 
 
 		 236 aa  77.4  0.0000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0214647 
 
 
-
 
NC_011662  Tmz1t_3688  response regulator receiver protein  32.58 
 
 		 133 aa  77.4  0.0000000000002  Thauera sp. MZ1T  Bacteria  normal  0.478813  n/a   
 
 
-
 
NC_013889  TK90_2396  CheA signal transduction histidine kinase  37.17 
 
 		 1832 aa  78.2  0.0000000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  0.412957 
 
 
-
 
NC_013411  GYMC61_3444  response regulator receiver protein  40.54 
 
 		 120 aa  77.8  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_3485  two component transcriptional regulator  36.67 
 
 		 236 aa  77.4  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_2316  response regulator receiver protein  37.39 
 
 		 226 aa  76.6  0.0000000000004  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.00000147543  hitchhiker  0.000888492 
 
 
-
 
NC_009483  Gura_1798  response regulator receiver protein  33.04 
 
 		 421 aa  76.6  0.0000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  0.0425033  n/a   
 
 
-
 
NC_007604  Synpcc7942_1816  periplasmic sensor hybrid histidine kinase  26.72 
 
 		 977 aa  76.6  0.0000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.218789  normal  0.39116 
 
 
-
 
NC_011146  Gbem_1530  response regulator receiver protein  33.04 
 
 		 405 aa  76.6  0.0000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4410  response regulator receiver protein  36.61 
 
 		 131 aa  76.6  0.0000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.686937 
 
 
-
 
NC_014158  Tpau_3631  two component transcriptional regulator, winged helix family  37.01 
 
 		 235 aa  77  0.0000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_3833  response regulator receiver protein  36.94 
 
 		 117 aa  76.3  0.0000000000005  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_2398  two component, sigma54 specific, transcriptional regulator, Fis family  40.57 
 
 		 469 aa  76.3  0.0000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.313034  n/a   
 
 
-
 
NC_012917  PC1_2692  two component transcriptional regulator, winged helix family  33.86 
 
 		 229 aa  76.3  0.0000000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  29.6 
 
 		 229 aa  76.3  0.0000000000005  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.179681 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  38.39 
 
 		 322 aa  76.3  0.0000000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_012918  GM21_2686  response regulator receiver protein  33.04 
 
 		 410 aa  76.3  0.0000000000006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000608002 
 
 
-
 
NC_012669  Bcav_3778  two component transcriptional regulator, winged helix family  38.21 
 
 		 232 aa  76.3  0.0000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0820994  normal  1 
 
 
-
 
NC_011145  AnaeK_2310  two component, sigma54 specific, transcriptional regulator, Fis family  40.57 
 
 		 469 aa  76.3  0.0000000000006  Anaeromyxobacter sp. K  Bacteria  normal  0.294968  n/a   
 
 
-
 
NC_009972  Haur_3446  integral membrane sensor hybrid histidine kinase  25.2 
 
 		 791 aa  75.9  0.0000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.285515  n/a   
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  39.64 
 
 		 120 aa  75.9  0.0000000000007  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1555  two component, sigma54 specific, Fis family transcriptional regulator  40.57 
 
 		 467 aa  75.9  0.0000000000007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.21045  n/a   
 
 
-
 
NC_008609  Ppro_0713  response regulator receiver protein  34.78 
 
 		 321 aa  75.9  0.0000000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  36.13 
 
 		 451 aa  75.9  0.0000000000007  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_014150  Bmur_0291  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 		 444 aa  75.5  0.0000000000008  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00612417  n/a   
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  36.72 
 
 		 231 aa  75.9  0.0000000000008  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_013422  Hneap_0135  integral membrane sensor hybrid histidine kinase  28 
 
 		 858 aa  75.5  0.0000000000008  Halothiobacillus neapolitanus c2  Bacteria  normal  0.711395  n/a   
 
 
-
 
NC_009675  Anae109_0824  response regulator receiver protein  38.14 
 
 		 130 aa  75.5  0.0000000000009  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.494027  normal  0.693271 
 
 
-
 
NC_009831  Ssed_3303  two component transcriptional regulator  32.86 
 
 		 229 aa  75.5  0.0000000000009  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000702519  hitchhiker  0.00000106408 
 
 
-
 
NC_008146  Mmcs_0350  PAS/PAC sensor hybrid histidine kinase  36 
 
 		 1390 aa  75.5  0.0000000000009  Mycobacterium sp. MCS  Bacteria  normal  0.0937102  n/a   
 
 
-
 
NC_008705  Mkms_0360  PAS/PAC sensor hybrid histidine kinase  36 
 
 		 1390 aa  75.5  0.0000000000009  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.592677 
 
 
-
 
NC_009077  Mjls_0339  PAS/PAC sensor hybrid histidine kinase  36 
 
 		 1390 aa  75.5  0.0000000000009  Mycobacterium sp. JLS  Bacteria  normal  0.726297  normal  0.77171 
 
 
-
 
CP001637  EcDH1_4118  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  35.2 
 
 		 469 aa  75.1  0.000000000001  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_03702  hypothetical protein  35.2 
 
 		 469 aa  75.1  0.000000000001  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A4095  nitrogen regulation protein NR(I)  35.2 
 
 		 469 aa  75.1  0.000000000001  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3767  response regulator receiver protein  32.74 
 
 		 130 aa  75.5  0.000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.401563  n/a   
 
 
-
 
NC_010658  SbBS512_E4344  nitrogen regulation protein NR(I)  35.2 
 
 		 469 aa  75.1  0.000000000001  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3354  response regulator receiver protein  33.62 
 
 		 147 aa  75.1  0.000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.878811  normal  1 
 
 
-
 
NC_010338  Caul_0611  response regulator receiver protein  46.15 
 
 		 121 aa  75.1  0.000000000001  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
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