More than 300 homologs were found in PanDaTox collection
for query gene Franean1_4062 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  100 
 
 		 216 aa  430  1e-119  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  98.61 
 
 		 244 aa  424  1e-118  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  83.96 
 
 		 213 aa  361  5.0000000000000005e-99  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  71.77 
 
 		 224 aa  303  1.0000000000000001e-81  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  71.71 
 
 		 211 aa  294  6e-79  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  69.8 
 
 		 231 aa  278  6e-74  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  65.55 
 
 		 218 aa  277  1e-73  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  67.77 
 
 		 216 aa  276  1e-73  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  66.67 
 
 		 233 aa  274  8e-73  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  66.51 
 
 		 216 aa  270  2e-71  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  66.83 
 
 		 231 aa  269  2.9999999999999997e-71  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  64.42 
 
 		 221 aa  259  2e-68  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  62.68 
 
 		 212 aa  259  2e-68  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  63.64 
 
 		 213 aa  258  4e-68  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal  1 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  62.2 
 
 		 212 aa  257  9e-68  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.967001 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  63.45 
 
 		 226 aa  257  1e-67  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  64.65 
 
 		 214 aa  256  1e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal  1 
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  64.45 
 
 		 225 aa  244  9e-64  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.665179 
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  60 
 
 		 223 aa  243  1.9999999999999999e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  59.91 
 
 		 219 aa  241  6e-63  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_013093  Amir_6098  two component transcriptional regulator, LuxR family  64.73 
 
 		 218 aa  239  2.9999999999999997e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  56.87 
 
 		 226 aa  238  5e-62  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_007333  Tfu_3035  LuxR response regulator receiver  61.46 
 
 		 223 aa  233  1.0000000000000001e-60  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  57.97 
 
 		 254 aa  234  1.0000000000000001e-60  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_013093  Amir_1910  two component transcriptional regulator, LuxR family  58.33 
 
 		 218 aa  231  4.0000000000000004e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  56.02 
 
 		 233 aa  230  1e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0277195 
 
 
-
 
NC_013947  Snas_3097  two component transcriptional regulator, LuxR family  58.71 
 
 		 222 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.472018  normal  0.507317 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  54.95 
 
 		 219 aa  223  2e-57  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  56.72 
 
 		 239 aa  220  9.999999999999999e-57  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  54.95 
 
 		 223 aa  216  2.9999999999999998e-55  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  52.43 
 
 		 209 aa  213  1.9999999999999998e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  51.94 
 
 		 216 aa  211  7e-54  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_008726  Mvan_1427  two component LuxR family transcriptional regulator  51.22 
 
 		 212 aa  209  2e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  50.99 
 
 		 217 aa  209  2e-53  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_4126  two component LuxR family transcriptional regulator  51.94 
 
 		 220 aa  207  1e-52  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4201  two component LuxR family transcriptional regulator  51.94 
 
 		 215 aa  207  1e-52  Mycobacterium sp. KMS  Bacteria  normal  0.180608  normal  1 
 
 
-
 
NC_009077  Mjls_4357  two component LuxR family transcriptional regulator  51.94 
 
 		 215 aa  207  1e-52  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.171113 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.92 
 
 		 214 aa  204  8e-52  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  55.94 
 
 		 216 aa  204  1e-51  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_1076  two component LuxR family transcriptional regulator  52.2 
 
 		 228 aa  203  1e-51  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1092  two component LuxR family transcriptional regulator  52.2 
 
 		 228 aa  203  1e-51  Mycobacterium sp. KMS  Bacteria  normal  0.123414  normal  0.110897 
 
 
-
 
NC_009077  Mjls_1103  two component LuxR family transcriptional regulator  52.2 
 
 		 228 aa  203  1e-51  Mycobacterium sp. JLS  Bacteria  normal  0.191898  normal  1 
 
 
-
 
NC_008726  Mvan_2548  two component LuxR family transcriptional regulator  54.37 
 
 		 216 aa  196  2.0000000000000003e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.971783  normal  1 
 
 
-
 
NC_013441  Gbro_2140  response regulator receiver  53.08 
 
 		 218 aa  192  3e-48  Gordonia bronchialis DSM 43247  Bacteria  normal  0.95288  n/a   
 
 
-
 
NC_013757  Gobs_4820  two component transcriptional regulator, LuxR family  51.74 
 
 		 218 aa  187  7e-47  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  45.91 
 
 		 242 aa  181  6e-45  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  43.54 
 
 		 221 aa  181  8.000000000000001e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  47.8 
 
 		 208 aa  178  7e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal  1 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  44.24 
 
 		 236 aa  176  3e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  46.8 
 
 		 227 aa  173  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_008541  Arth_3459  two component LuxR family transcriptional regulator  47.69 
 
 		 212 aa  170  1e-41  Arthrobacter sp. FB24  Bacteria  normal  0.775478  n/a   
 
 
-
 
NC_010571  Oter_0647  two component LuxR family transcriptional regulator  44.95 
 
 		 225 aa  170  1e-41  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  45.75 
 
 		 222 aa  169  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_010718  Nther_0692  two component transcriptional regulator, LuxR family  41.63 
 
 		 213 aa  170  2e-41  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_1701  response regulator receiver protein  44.44 
 
 		 224 aa  169  3e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0169479 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  45.93 
 
 		 219 aa  168  5e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  42.11 
 
 		 213 aa  168  6e-41  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  43.12 
 
 		 253 aa  168  7e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  45.63 
 
 		 220 aa  166  2e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  40.49 
 
 		 219 aa  164  1.0000000000000001e-39  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  39.23 
 
 		 217 aa  163  2.0000000000000002e-39  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  44.66 
 
 		 221 aa  163  2.0000000000000002e-39  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  41.26 
 
 		 228 aa  162  4.0000000000000004e-39  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  41.9 
 
 		 220 aa  162  4.0000000000000004e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  37.91 
 
 		 224 aa  162  5.0000000000000005e-39  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  40.76 
 
 		 241 aa  161  6e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  41.71 
 
 		 237 aa  161  8.000000000000001e-39  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013521  Sked_11330  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.39 
 
 		 224 aa  161  8.000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.0103975 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  43.07 
 
 		 215 aa  161  9e-39  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  40.1 
 
 		 221 aa  160  1e-38  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  39.63 
 
 		 225 aa  160  1e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  38.5 
 
 		 224 aa  160  1e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  44.08 
 
 		 218 aa  160  2e-38  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  44.98 
 
 		 220 aa  159  3e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal  1 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  40.87 
 
 		 217 aa  159  4e-38  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  40.76 
 
 		 237 aa  159  4e-38  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  38.86 
 
 		 224 aa  159  4e-38  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  42.23 
 
 		 213 aa  159  4e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  43.58 
 
 		 225 aa  158  5e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  41.4 
 
 		 303 aa  158  6e-38  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  39.34 
 
 		 215 aa  158  7e-38  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  41.71 
 
 		 219 aa  158  7e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  43.33 
 
 		 213 aa  158  7e-38  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  38.39 
 
 		 224 aa  158  8e-38  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  38.39 
 
 		 224 aa  158  8e-38  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  43.14 
 
 		 218 aa  157  8e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  40 
 
 		 234 aa  157  8e-38  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  38.71 
 
 		 224 aa  157  9e-38  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_1659  two component transcriptional regulator, LuxR family  43.78 
 
 		 207 aa  157  9e-38  Jonesia denitrificans DSM 20603  Bacteria  normal  0.319135  normal  0.0403017 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  39.34 
 
 		 215 aa  157  1e-37  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  39.34 
 
 		 215 aa  157  1e-37  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  39.34 
 
 		 215 aa  157  1e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  39.34 
 
 		 215 aa  157  1e-37  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  43.54 
 
 		 217 aa  157  1e-37  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  38.86 
 
 		 215 aa  157  1e-37  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  39.34 
 
 		 215 aa  157  1e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_2290  two component transcriptional regulator, LuxR family  44.93 
 
 		 208 aa  157  1e-37  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.00802134  hitchhiker  0.000628596 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  38.39 
 
 		 222 aa  156  2e-37  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  42.38 
 
 		 225 aa  156  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  39.44 
 
 		 216 aa  157  2e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
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