More than 300 homologs were found in PanDaTox collection
for query gene Dole_1351 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1351  response regulator receiver protein  100 
 
 
141 aa  284  2.9999999999999996e-76  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  53.96 
 
 
144 aa  141  3e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  51.52 
 
 
147 aa  139  9.999999999999999e-33  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  52.71 
 
 
143 aa  133  9e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  49.21 
 
 
135 aa  130  6.999999999999999e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  49.63 
 
 
147 aa  125  2.0000000000000002e-28  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  49.61 
 
 
139 aa  124  6e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  47.15 
 
 
151 aa  120  7e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  51.2 
 
 
131 aa  120  8e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  46.92 
 
 
157 aa  119  9.999999999999999e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  48 
 
 
147 aa  117  4.9999999999999996e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  47.2 
 
 
142 aa  110  5e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  47.2 
 
 
374 aa  110  5e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  48.09 
 
 
153 aa  109  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  48.74 
 
 
141 aa  108  2.0000000000000002e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  48.8 
 
 
408 aa  108  4.0000000000000004e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  46.83 
 
 
139 aa  107  5e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  39.68 
 
 
513 aa  107  8.000000000000001e-23  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  47.46 
 
 
129 aa  106  1e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  44.54 
 
 
122 aa  106  1e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  42.86 
 
 
494 aa  104  4e-22  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  45.38 
 
 
130 aa  103  6e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  46.22 
 
 
126 aa  103  7e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  41.73 
 
 
451 aa  103  9e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  42.06 
 
 
127 aa  103  1e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_007517  Gmet_2677  response regulator receiver sensor signal transduction histidine kinase  38.97 
 
 
395 aa  102  2e-21  Geobacter metallireducens GS-15  Bacteria  normal  0.971959  normal  0.344308 
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  44.44 
 
 
133 aa  102  2e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  49.6 
 
 
143 aa  102  2e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_009483  Gura_2932  response regulator receiver sensor signal transduction histidine kinase  40.44 
 
 
394 aa  102  2e-21  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000651793  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  40.62 
 
 
135 aa  101  3e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  40.91 
 
 
396 aa  100  6e-21  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  44.07 
 
 
128 aa  100  8e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  41.6 
 
 
458 aa  99.8  1e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  41.6 
 
 
458 aa  99.8  1e-20  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  44.17 
 
 
501 aa  99.8  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  40.15 
 
 
396 aa  98.6  2e-20  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_013173  Dbac_2666  two component, sigma54 specific, transcriptional regulator, Fis family  40.15 
 
 
459 aa  98.6  3e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2741  two component, sigma54 specific, Fis family transcriptional regulator  39.06 
 
 
474 aa  98.2  4e-20  Rhodoferax ferrireducens T118  Bacteria  normal  0.0363909  n/a   
 
 
-
 
NC_009512  Pput_3577  response regulator receiver protein  36.55 
 
 
393 aa  97.8  5e-20  Pseudomonas putida F1  Bacteria  decreased coverage  0.00266085  normal 
 
 
-
 
NC_002947  PP_2165  response regulator  36.55 
 
 
393 aa  97.4  6e-20  Pseudomonas putida KT2440  Bacteria  normal  0.0249002  normal  0.813701 
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  39.5 
 
 
430 aa  97.4  6e-20  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1706  response regulator receiver modulated serine phosphatase  36.55 
 
 
393 aa  97.4  6e-20  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000168842 
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  38.4 
 
 
458 aa  97.1  8e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  37.6 
 
 
508 aa  96.3  1e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  44.25 
 
 
403 aa  96.7  1e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  44.35 
 
 
121 aa  96.3  1e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  37.86 
 
 
462 aa  95.5  2e-19  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  35.48 
 
 
264 aa  95.5  2e-19  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  44.83 
 
 
151 aa  95.5  2e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007492  Pfl01_3849  response regulator receiver (CheY) modulated Serine phosphatase  35.77 
 
 
412 aa  95.9  2e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.658628 
 
 
-
 
NC_007498  Pcar_1042  two component signal transduction response regulator  37.5 
 
 
465 aa  95.5  2e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.472622  n/a   
 
 
-
 
NC_010501  PputW619_1682  response regulator receiver modulated serine phosphatase  36.11 
 
 
412 aa  95.5  2e-19  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  40 
 
 
129 aa  95.9  2e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0018  two component, sigma54 specific, transcriptional regulator, Fis family  37.59 
 
 
461 aa  95.1  3e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.709029  normal  0.924426 
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  39.32 
 
 
486 aa  95.1  3e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  43.09 
 
 
151 aa  94.4  4e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013223  Dret_0887  response regulator receiver modulated metal dependent phosphohydrolase  40.94 
 
 
496 aa  94.4  4e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.384329  normal 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  44 
 
 
382 aa  94.4  4e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_013223  Dret_0970  two component, sigma54 specific, transcriptional regulator, Fis family  40.58 
 
 
473 aa  94.4  5e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0157817  hitchhiker  0.00000223455 
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  47.62 
 
 
463 aa  94  6e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  38.71 
 
 
465 aa  94  7e-19  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_009512  Pput_4322  two component, sigma54 specific, Fis family transcriptional regulator  38.28 
 
 
444 aa  93.6  7e-19  Pseudomonas putida F1  Bacteria  normal  0.713581  normal 
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  38.21 
 
 
465 aa  94  7e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  39.57 
 
 
490 aa  93.6  7e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_013422  Hneap_2080  two component, sigma54 specific, transcriptional regulator, Fis family  39.69 
 
 
461 aa  93.6  8e-19  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0433  two component, sigma54 specific, Fis family transcriptional regulator  42.59 
 
 
472 aa  93.6  8e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  33.87 
 
 
266 aa  93.6  8e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0057  histidine kinase  35.71 
 
 
588 aa  93.6  9e-19  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000000185994 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  40.16 
 
 
142 aa  93.6  9e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  40 
 
 
144 aa  92.8  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_009483  Gura_3391  two component, sigma-54 specific, Fis family transcriptional regulator  39.85 
 
 
455 aa  93.2  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  0.111806  n/a   
 
 
-
 
NC_011769  DvMF_2109  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
515 aa  93.2  1e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011989  Avi_2137  two component response regulator  38.89 
 
 
454 aa  92.8  1e-18  Agrobacterium vitis S4  Bacteria  normal  0.354757  n/a   
 
 
-
 
NC_013223  Dret_0548  two component, sigma54 specific, transcriptional regulator, Fis family  37.3 
 
 
452 aa  92.8  1e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.902927  normal 
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  38.52 
 
 
343 aa  93.2  1e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  41.59 
 
 
129 aa  92.8  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008554  Sfum_2806  two component, sigma54 specific, Fis family transcriptional regulator  38.52 
 
 
450 aa  92.8  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  41.74 
 
 
137 aa  92.4  2e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1119  sensor histidine kinase/response regulator  37.4 
 
 
420 aa  92.4  2e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0065  histidine kinase  35.94 
 
 
578 aa  92.4  2e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  36.96 
 
 
145 aa  92  2e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  41.38 
 
 
119 aa  92.4  2e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  37.01 
 
 
461 aa  92.4  2e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_008340  Mlg_2623  two component, sigma54 specific, Fis family transcriptional regulator  39.67 
 
 
456 aa  92.4  2e-18  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2828  response regulator receiver sensor signal transduction histidine kinase  34.56 
 
 
410 aa  92.4  2e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  43.36 
 
 
157 aa  91.7  3e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  40.32 
 
 
468 aa  92  3e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  34.72 
 
 
508 aa  91.7  3e-18  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_009675  Anae109_1991  response regulator receiver modulated metal dependent phosphohydrolase  36.84 
 
 
357 aa  92  3e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0818  two component transcriptional regulator  36.43 
 
 
267 aa  91.7  3e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000529672  n/a   
 
 
-
 
NC_011369  Rleg2_1630  two component, sigma54 specific, transcriptional regulator, Fis family  38.89 
 
 
454 aa  91.7  3e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.325918  normal  0.3827 
 
 
-
 
NC_011891  A2cp1_0673  two component, sigma54 specific, transcriptional regulator, Fis family  37.69 
 
 
458 aa  91.3  4e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  38.02 
 
 
135 aa  91.3  4e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2549  response regulator receiver sensor signal transduction histidine kinase  40.31 
 
 
446 aa  91.3  4e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  42.31 
 
 
301 aa  91.3  4e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0259  two component signal transduction response regulator  37.61 
 
 
513 aa  91.3  4e-18  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0673  two component, sigma54 specific, transcriptional regulator, Fis family  37.69 
 
 
457 aa  91.3  4e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2310  two component, sigma54 specific, transcriptional regulator, Fis family  39.52 
 
 
469 aa  90.9  5e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.294968  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  41.12 
 
 
120 aa  90.9  5e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  41.67 
 
 
151 aa  90.9  5e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
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