Gene Rfer_2741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2741 
Symbol 
ID3962740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3025451 
End bp3026875 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content52% 
IMG OID637917560 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_523985 
Protein GI89901514 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0363909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCA GAATATTAGT TGTTGACGAC GAAGAGATTG TTATAAGAAG TTGCGTGCGC 
ATACTCAACG ATGACCTGTA TACCGTGGAC TCTGCCCCGG GCGGCTTTGA GGCCTTGAAA
AAAGTCGATG AGACAGCCTA CGATATTCTC ATTCTCGACG TCATGATGCC CAAGATGGAC
GGTCTTGAGG TCTTGCAACA CGTGAAGGAA AGGCATCCGG AGATCGACGT CATCATGATG
ACCGGGTTGT CCGAGATTCA AACGGCTGTC AAGGCCATGA AGCTGGGTGC ATTTGACTAC
CTGTCAAAGC CCTTCGATCC AGATGAACTC AAGCTTGTTG TCAATCGCGC CCTGGAGCGG
CGGCAACTGA TGCAAGAGAA TCGCAAGCTC AAGACCGAAG TCAGCTCAAA ATATCGTTTT
GAGAACATCA TCGGCTCGAG TCCGCCGATG CAGGCAGTCT TTGGCCTGAT CGCCAAGTGT
GCGCCGACAA ACAGCACCGT GCTGATCACC GGAGAAAGTG GCACCGGCAA GGAAATGATT
GCGCGCGCTA TTCATTACAA CAGCTTGCGC AAGGATCAGC CATTTGTCAC CGTTGACTGC
AACACGCTGA GTGAGAACCT CCTGGAGAGT GAATTGTTCG GGCACACCAA GGGATCCTTT
ACCGGGGCCG TGGCCAACAA ACGCGGCATG TTCGATGTCG CCAACAATGG CACACTGTTC
CTCGACGAAT TCGGCAATAT CCCGCTGTCA ACCCAAGCCA AATTGTTGCG GGTGATTCAG
GAGCGTGAGT TCAGGCCGGT TGGCACGACC ACCAACCAGA AGACCAATGT CCGGCTCATT
ACCGCGACCA ACAAGGATCT CAAGGCGATG GTGGCTGAAG GAACGTTCCG TGAGGATCTT
TACTACCGCA TCAACGTCTT CCCAATTCAC TCGCCAGCCT TGCGCGAGCG CCGTGACGAT
ATCCCCGCGC TGGCCTTTCA CTTCCTGAAG ATTTTTTGCA GTGAACTGGG AAAGCCCGTG
TCAGAGATTT CGGAAGGAGC GATGAGTCTG CTGATGAACT ATGGCTGGCC AGGTAATGTG
CGCGAACTTG AAAACACCAT GCAGCGGGCA GTGATCCTGT CGTCTGACGG CATCATCCGT
CAGGCGCATC TGGCTAGCAT AATTGACAAT TCTCCCCGGC TCGATCTTGA CGTGCCTCGT
ACCAGCGATG AACTCAAGAG AATTAAAAAA ATCGCCAGAG AAAAATCGGT TGAGGAAGTT
GAGAAGCTGT TCGTCCAGGA AACACTAAAA AGAAACGCGT CGAACGTGAC CCGCAGTGCT
GAAGAAACCG GTATGCAGCG CACCAATTTT CAGGCCTTGA TGAAGAAGTA CAACATTCGG
GTCCGGGATA CCGAATACGA CGACGGCGAA CCCGAACCCA TTTGA
 
Protein sequence
MSARILVVDD EEIVIRSCVR ILNDDLYTVD SAPGGFEALK KVDETAYDIL ILDVMMPKMD 
GLEVLQHVKE RHPEIDVIMM TGLSEIQTAV KAMKLGAFDY LSKPFDPDEL KLVVNRALER
RQLMQENRKL KTEVSSKYRF ENIIGSSPPM QAVFGLIAKC APTNSTVLIT GESGTGKEMI
ARAIHYNSLR KDQPFVTVDC NTLSENLLES ELFGHTKGSF TGAVANKRGM FDVANNGTLF
LDEFGNIPLS TQAKLLRVIQ EREFRPVGTT TNQKTNVRLI TATNKDLKAM VAEGTFREDL
YYRINVFPIH SPALRERRDD IPALAFHFLK IFCSELGKPV SEISEGAMSL LMNYGWPGNV
RELENTMQRA VILSSDGIIR QAHLASIIDN SPRLDLDVPR TSDELKRIKK IAREKSVEEV
EKLFVQETLK RNASNVTRSA EETGMQRTNF QALMKKYNIR VRDTEYDDGE PEPI