More than 300 homologs were found in PanDaTox collection
for query gene Dole_1350 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1350  response regulator receiver protein  100 
 
 
147 aa  294  3e-79  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  48.89 
 
 
144 aa  140  7e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  51.52 
 
 
141 aa  139  9e-33  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  53.66 
 
 
139 aa  136  7.999999999999999e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  49.21 
 
 
151 aa  136  1e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  49.62 
 
 
157 aa  135  2e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  53.12 
 
 
147 aa  132  1.9999999999999998e-30  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  46.34 
 
 
135 aa  125  1.0000000000000001e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  44.29 
 
 
143 aa  124  4.0000000000000003e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  45.59 
 
 
374 aa  123  8.000000000000001e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  48.84 
 
 
129 aa  123  9e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  47.69 
 
 
142 aa  123  1e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  48.82 
 
 
147 aa  122  1e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  46.09 
 
 
131 aa  117  6e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  50 
 
 
128 aa  116  7.999999999999999e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  42.45 
 
 
142 aa  115  1.9999999999999998e-25  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  50.45 
 
 
119 aa  114  3.9999999999999997e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  45.24 
 
 
141 aa  114  5e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  46.09 
 
 
121 aa  112  2.0000000000000002e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  43.1 
 
 
120 aa  111  4.0000000000000004e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  47.01 
 
 
153 aa  110  6e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  46.09 
 
 
139 aa  110  8.000000000000001e-24  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  40.48 
 
 
144 aa  109  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  41.61 
 
 
408 aa  109  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  41.88 
 
 
129 aa  109  2.0000000000000002e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  48.89 
 
 
143 aa  107  4.0000000000000004e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  35.57 
 
 
159 aa  107  6e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  40.34 
 
 
430 aa  106  9.000000000000001e-23  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  37.59 
 
 
264 aa  106  1e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  41.27 
 
 
126 aa  105  2e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  42.52 
 
 
151 aa  105  2e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  44.14 
 
 
151 aa  105  3e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  36.84 
 
 
266 aa  104  4e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  41.88 
 
 
137 aa  104  4e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  43.36 
 
 
403 aa  104  5e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  41.67 
 
 
301 aa  103  6e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  39.83 
 
 
122 aa  102  2e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  38.13 
 
 
461 aa  101  3e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  39.52 
 
 
157 aa  101  3e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  41.67 
 
 
451 aa  101  3e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  41.88 
 
 
413 aa  101  4e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  34.9 
 
 
173 aa  100  5e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  35.66 
 
 
133 aa  100  5e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_007498  Pcar_0259  two component signal transduction response regulator  42.98 
 
 
513 aa  100  7e-21  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  36.29 
 
 
1139 aa  100  7e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_008751  Dvul_1657  two component, sigma54 specific, Fis family transcriptional regulator  40.71 
 
 
459 aa  100  7e-21  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000574549  normal  0.302016 
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  37.3 
 
 
145 aa  100  8e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  41.67 
 
 
151 aa  100  8e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  39.2 
 
 
135 aa  99.8  1e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  38.58 
 
 
135 aa  99.4  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  42.06 
 
 
458 aa  98.6  2e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  42.06 
 
 
462 aa  98.2  3e-20  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  43.24 
 
 
465 aa  98.2  3e-20  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  41.59 
 
 
458 aa  97.8  4e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2387  two component, sigma-54 specific, Fis family transcriptional regulator  43.7 
 
 
510 aa  97.8  4e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  42.06 
 
 
463 aa  97.8  4e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  42.06 
 
 
456 aa  97.8  5e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  42.06 
 
 
464 aa  97.4  5e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  42.06 
 
 
464 aa  97.8  5e-20  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  40.98 
 
 
127 aa  97.4  6e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  36.89 
 
 
470 aa  97.1  6e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  38.81 
 
 
142 aa  97.4  6e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  44.86 
 
 
406 aa  97.4  6e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  42.48 
 
 
455 aa  97.1  7e-20  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  42.06 
 
 
454 aa  97.1  7e-20  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0976  anti-sigma-factor antagonist  37.98 
 
 
237 aa  96.7  9e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  38.06 
 
 
516 aa  96.3  1e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  39.25 
 
 
129 aa  96.3  1e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  40.71 
 
 
458 aa  96.7  1e-19  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  37.7 
 
 
470 aa  95.9  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  37.61 
 
 
456 aa  95.5  2e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  36.84 
 
 
508 aa  95.5  2e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_007517  Gmet_1055  two component, sigma54 specific, Fis family transcriptional regulator  42.15 
 
 
508 aa  95.9  2e-19  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00334907 
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  42.06 
 
 
456 aa  95.5  2e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1117  response regulator  40.19 
 
 
127 aa  95.1  3e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  35.71 
 
 
454 aa  95.1  3e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  35.86 
 
 
471 aa  95.1  3e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  42.74 
 
 
411 aa  95.1  3e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_007908  Rfer_2741  two component, sigma54 specific, Fis family transcriptional regulator  34 
 
 
474 aa  95.1  3e-19  Rhodoferax ferrireducens T118  Bacteria  normal  0.0363909  n/a   
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
457 aa  94.7  3e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_002977  MCA2541  nitrogen regulation protein NR(I)  34.97 
 
 
470 aa  94.4  4e-19  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  41.12 
 
 
453 aa  94.4  5e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  38.21 
 
 
466 aa  94  5e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3555  two component, sigma54 specific, transcriptional regulator, Fis family  46.53 
 
 
489 aa  94  6e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.369206  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  39.83 
 
 
130 aa  94  6e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  40.48 
 
 
457 aa  94  6e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3536  two component Fis family transcriptional regulator  38.28 
 
 
447 aa  94  6e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3623  two component, sigma54 specific, transcriptional regulator, Fis family  46.53 
 
 
489 aa  94  6e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.568637  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  42.73 
 
 
129 aa  94  6e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_013440  Hoch_0018  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
461 aa  93.6  7e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.709029  normal  0.924426 
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  37.21 
 
 
508 aa  94  7e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3471  two component, sigma54 specific, Fis family transcriptional regulator  46.53 
 
 
489 aa  94  7e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  39.82 
 
 
396 aa  93.6  7e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  37.69 
 
 
472 aa  94  7e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_010814  Glov_2245  two component, sigma54 specific, transcriptional regulator, Fis family  42.86 
 
 
460 aa  93.6  8e-19  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  38.98 
 
 
494 aa  93.6  8e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  39.32 
 
 
385 aa  93.6  9e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_002939  GSU1119  sensor histidine kinase/response regulator  42.34 
 
 
420 aa  92.8  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1685  two component Fis family transcriptional regulator  38.57 
 
 
457 aa  93.2  1e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00529377  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  43.8 
 
 
490 aa  93.2  1e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
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