More than 300 homologs were found in PanDaTox collection
for query gene Vapar_5041 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  100 
 
 
397 aa  802    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  75 
 
 
393 aa  575  1.0000000000000001e-163  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  75.44 
 
 
411 aa  561  1.0000000000000001e-159  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_007948  Bpro_0590  acyl-CoA dehydrogenase-like  69.59 
 
 
414 aa  516  1.0000000000000001e-145  Polaromonas sp. JS666  Bacteria  normal  0.882446  normal 
 
 
-
 
NC_007347  Reut_A2181  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  63.82 
 
 
389 aa  467  9.999999999999999e-131  Ralstonia eutropha JMP134  Bacteria  normal  0.594963  n/a   
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  65.46 
 
 
388 aa  466  9.999999999999999e-131  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  61.99 
 
 
389 aa  457  1e-127  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  61.5 
 
 
391 aa  450  1e-125  Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  61.5 
 
 
391 aa  450  1e-125  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  62.63 
 
 
399 aa  440  9.999999999999999e-123  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  62.11 
 
 
389 aa  439  9.999999999999999e-123  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  59.13 
 
 
404 aa  435  1e-121  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  59.59 
 
 
401 aa  436  1e-121  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  59.59 
 
 
402 aa  426  1e-118  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  59.59 
 
 
402 aa  426  1e-118  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  56.12 
 
 
391 aa  394  1e-108  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  52.42 
 
 
390 aa  394  1e-108  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  56.53 
 
 
413 aa  389  1e-107  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  57.33 
 
 
398 aa  389  1e-107  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  53.98 
 
 
391 aa  386  1e-106  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  51.55 
 
 
383 aa  372  1e-102  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_5091  acyl-CoA dehydrogenase domain-containing protein  54.55 
 
 
378 aa  374  1e-102  Paracoccus denitrificans PD1222  Bacteria  normal  0.580305  normal 
 
 
-
 
NC_011894  Mnod_1203  acyl-CoA dehydrogenase domain protein  52.69 
 
 
381 aa  366  1e-100  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  50.26 
 
 
393 aa  362  8e-99  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_008044  TM1040_2239  acyl-CoA dehydrogenase-like  49.22 
 
 
384 aa  346  5e-94  Ruegeria sp. TM1040  Bacteria  normal  0.708615  normal 
 
 
-
 
NC_013131  Caci_5525  acyl-CoA dehydrogenase domain protein  44.72 
 
 
397 aa  278  1e-73  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6321  acyl-CoA dehydrogenase domain protein  43.04 
 
 
383 aa  252  9.000000000000001e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.249622  normal  0.451082 
 
 
-
 
NC_012880  Dd703_3095  acyl-CoA dehydrogenase domain protein  39.32 
 
 
397 aa  248  2e-64  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2160  acyl-CoA dehydrogenase domain protein  45.08 
 
 
391 aa  229  5e-59  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.828679 
 
 
-
 
NC_007333  Tfu_1282  putative acyl-CoA dehydrogenase  38.61 
 
 
392 aa  226  6e-58  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1049  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
405 aa  223  4.9999999999999996e-57  Salinispora arenicola CNS-205  Bacteria  normal  0.239765  normal  0.0805171 
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  37.97 
 
 
379 aa  221  1.9999999999999999e-56  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  38.29 
 
 
400 aa  219  7e-56  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  38.06 
 
 
379 aa  214  1.9999999999999998e-54  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3365  acyl-CoA dehydrogenase domain protein  36.96 
 
 
381 aa  213  4.9999999999999996e-54  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.122497 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  37.6 
 
 
380 aa  213  5.999999999999999e-54  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  37.36 
 
 
388 aa  212  1e-53  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  37.64 
 
 
388 aa  210  3e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_013739  Cwoe_4400  acyl-CoA dehydrogenase domain protein  37.36 
 
 
394 aa  210  4e-53  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  41.26 
 
 
379 aa  209  6e-53  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  36.55 
 
 
385 aa  209  6e-53  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  37.24 
 
 
385 aa  209  7e-53  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008701  Pisl_1436  butyryl-CoA dehydrogenase  34.88 
 
 
410 aa  209  8e-53  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.170652  hitchhiker  0.00553945 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  35.81 
 
 
379 aa  207  2e-52  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  35.54 
 
 
378 aa  207  3e-52  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_009483  Gura_3313  acyl-CoA dehydrogenase domain-containing protein  36.22 
 
 
384 aa  207  3e-52  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  36.56 
 
 
379 aa  207  3e-52  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  36.56 
 
 
379 aa  207  3e-52  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0714  butyryl-CoA dehydrogenase  38.74 
 
 
384 aa  206  6e-52  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5641  Butyryl-CoA dehydrogenase  36.39 
 
 
379 aa  206  7e-52  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0298  acyl-CoA dehydrogenase domain protein  38.59 
 
 
381 aa  206  8e-52  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2300  acyl-CoA dehydrogenase domain-containing protein  35.19 
 
 
414 aa  205  1e-51  Roseiflexus sp. RS-1  Bacteria  normal  0.242601  normal 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  35.79 
 
 
381 aa  205  1e-51  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  36.13 
 
 
388 aa  205  1e-51  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  41.14 
 
 
379 aa  204  2e-51  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  35.2 
 
 
642 aa  204  2e-51  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  37.06 
 
 
398 aa  204  2e-51  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  35.71 
 
 
379 aa  204  2e-51  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  38.22 
 
 
388 aa  204  2e-51  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  38.1 
 
 
386 aa  204  3e-51  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0762  acyl-CoA dehydrogenase domain-containing protein  38.08 
 
 
381 aa  203  4e-51  Meiothermus ruber DSM 1279  Bacteria  normal  0.927466  normal  0.783766 
 
 
-
 
NC_009767  Rcas_3165  acyl-CoA dehydrogenase domain-containing protein  36.64 
 
 
445 aa  202  6e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.256023  normal 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  36.21 
 
 
376 aa  202  6e-51  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  36.39 
 
 
376 aa  202  7e-51  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  36.39 
 
 
381 aa  202  7e-51  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  35.57 
 
 
386 aa  202  7e-51  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_009073  Pcal_0838  butyryl-CoA dehydrogenase  33.79 
 
 
410 aa  202  8e-51  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  36.39 
 
 
381 aa  202  8e-51  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  36.21 
 
 
376 aa  202  9e-51  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  36.21 
 
 
376 aa  202  9e-51  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.1 
 
 
376 aa  202  9.999999999999999e-51  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  36.1 
 
 
376 aa  202  9.999999999999999e-51  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  35.89 
 
 
386 aa  202  9.999999999999999e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0136  acyl-CoA dehydrogenase domain protein  36.19 
 
 
379 aa  201  1.9999999999999998e-50  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  34.99 
 
 
379 aa  201  1.9999999999999998e-50  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.1 
 
 
376 aa  201  1.9999999999999998e-50  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  34.99 
 
 
379 aa  201  1.9999999999999998e-50  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  36.1 
 
 
381 aa  201  1.9999999999999998e-50  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  34.99 
 
 
379 aa  201  1.9999999999999998e-50  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  37.35 
 
 
381 aa  201  3e-50  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009376  Pars_0456  butyryl-CoA dehydrogenase  34.22 
 
 
410 aa  201  3e-50  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.820933  normal 
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  36.26 
 
 
380 aa  200  3.9999999999999996e-50  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  37.56 
 
 
385 aa  200  3.9999999999999996e-50  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_011831  Cagg_0741  acyl-CoA dehydrogenase domain protein  34.53 
 
 
417 aa  200  3.9999999999999996e-50  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.37799  normal  0.427722 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  37.56 
 
 
385 aa  200  3.9999999999999996e-50  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  34.73 
 
 
379 aa  200  3.9999999999999996e-50  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  34.55 
 
 
384 aa  199  5e-50  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  36.42 
 
 
376 aa  199  5e-50  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  34.73 
 
 
379 aa  199  5e-50  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  36.86 
 
 
380 aa  199  5e-50  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  34.73 
 
 
379 aa  199  7e-50  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  34.73 
 
 
379 aa  199  7e-50  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3276  acyl-CoA dehydrogenase-like  42.3 
 
 
382 aa  199  7.999999999999999e-50  Frankia sp. CcI3  Bacteria  normal  normal  0.863338 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  34.55 
 
 
384 aa  199  7.999999999999999e-50  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  34.73 
 
 
379 aa  199  9e-50  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  34.57 
 
 
379 aa  199  1.0000000000000001e-49  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  34.29 
 
 
384 aa  198  1.0000000000000001e-49  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  35.44 
 
 
384 aa  199  1.0000000000000001e-49  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  35.11 
 
 
384 aa  198  2.0000000000000003e-49  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  36.7 
 
 
380 aa  197  2.0000000000000003e-49  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
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