Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1076 |
Symbol | acdA |
ID | 2553371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1143625 |
End bp | 1144764 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637149777 |
Product | acyl-CoA dehydrogenase, short-chain specific |
Protein accession | NP_905291 |
Protein GI | 34540812 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.228764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTT CTCAGACACC CCAAGAACAA TTGTTTCTTG AGATGATCCG CAGTTTCGCC GAGAAAGAAG TAAAACCTCT GGCGGCAGAA ATTGACGAGC AGGAACGTTT CCCCATCGAA ACAGTAAAGA AGATGGGCGA AATCGGACTG ATGGGCATCC CTTTCCCCGT TGAATACGGT GGTGCCGGCG GTACAAACGT AATGTATTCA ATGGCAGTGG AGGAACTAAG CCGTGTATGT GCTACCACAG GCGTGGTTCT CTCTGCACAC ACATCTTTGT GCGCAGCTCC CATCTACGAA AATGGAACAG AAGAACAAAA GATGAAGTAT TTGCCGAAAC TCTGTTCTGG CGAATGGATC GGTGCATTTG GACTTACCGA ACCCAATGCA GGTACGGATG CTGCTGCTCA GCAAACTTTT GCTGAAGAAA AGGAAGATCA TTTCGTACTT AACGGTAACA AGATTTTTAT CACCAATGCC GAATATGCTC ACGTATACGT GGTATTTGCC ATGACAGATA AGAGCCAGGG CACACGTGGT ATCACCGCTT TCATCGTTGA AAAAGGAACT CCCGGGTTCT CTATCGGAAA GAAAGAGCTT AAGATGGGTA TCCGTGGTTC GGCTACATGC GAACTTATTT TTGAAAACTG TATCGTCCCC AAAGAGAATC TTCTCGGTCG CGTAGGCGGT GGCTTCAAGA TCGCCATGAA AACCCTTGAT GGCGGACGTA TCGGTATCGC ATCTCAGGCC CTCGGTATTG CACAGGGAGC TATGGACGAG ACGGTGAAGT ACACCAAAGA GCGTAAACAA TTCGGTCGCA GCATCGCACA ATTCCAGAAC ACGCAATTCC AACTCGCCGA CTTGCAATGC CGTATTCAGG CATCTCGTTT GCTGGTTCGT TTGGCAAGCT GGAAGAAGGA CATGAAGATG CCCTATACGA TGGAGTCGGC TCAAGCCAAA CTCTATTGCG CCGAAACGGC TATGGATATG ACTACGAAAG CGGTTCAGTT CCACGGAGGA TATGGCTATA CTCGTGAGTA TCCGGTAGAG CGTATGATGC GCGATGCTAA GATCACTGAG ATTTATGAAG GTACCAGCGA AGTTCAACGC TTGGTAATCG CATCCAACTT ATTAAAATAA
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Protein sequence | MNFSQTPQEQ LFLEMIRSFA EKEVKPLAAE IDEQERFPIE TVKKMGEIGL MGIPFPVEYG GAGGTNVMYS MAVEELSRVC ATTGVVLSAH TSLCAAPIYE NGTEEQKMKY LPKLCSGEWI GAFGLTEPNA GTDAAAQQTF AEEKEDHFVL NGNKIFITNA EYAHVYVVFA MTDKSQGTRG ITAFIVEKGT PGFSIGKKEL KMGIRGSATC ELIFENCIVP KENLLGRVGG GFKIAMKTLD GGRIGIASQA LGIAQGAMDE TVKYTKERKQ FGRSIAQFQN TQFQLADLQC RIQASRLLVR LASWKKDMKM PYTMESAQAK LYCAETAMDM TTKAVQFHGG YGYTREYPVE RMMRDAKITE IYEGTSEVQR LVIASNLLK
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