More than 300 homologs were found in PanDaTox collection
for query gene TM1040_2239 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_2239  acyl-CoA dehydrogenase-like  100 
 
 
384 aa  767    Ruegeria sp. TM1040  Bacteria  normal  0.708615  normal 
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  77.55 
 
 
383 aa  582  1.0000000000000001e-165  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  65.54 
 
 
390 aa  479  1e-134  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5091  acyl-CoA dehydrogenase domain-containing protein  67.02 
 
 
378 aa  479  1e-134  Paracoccus denitrificans PD1222  Bacteria  normal  0.580305  normal 
 
 
-
 
NC_011894  Mnod_1203  acyl-CoA dehydrogenase domain protein  63.19 
 
 
381 aa  455  1e-127  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  62.27 
 
 
391 aa  452  1.0000000000000001e-126  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  60.26 
 
 
391 aa  450  1e-125  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  59.9 
 
 
389 aa  449  1e-125  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  59.23 
 
 
393 aa  451  1e-125  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  60.26 
 
 
398 aa  441  1e-123  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  61.68 
 
 
399 aa  441  1e-123  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  59.59 
 
 
391 aa  439  9.999999999999999e-123  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_007347  Reut_A2181  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  58.81 
 
 
389 aa  440  9.999999999999999e-123  Ralstonia eutropha JMP134  Bacteria  normal  0.594963  n/a   
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  59.59 
 
 
391 aa  439  9.999999999999999e-123  Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  61.27 
 
 
389 aa  434  1e-121  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  58.47 
 
 
402 aa  432  1e-120  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  57.96 
 
 
402 aa  431  1e-119  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  59.11 
 
 
404 aa  428  1e-119  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  58.16 
 
 
401 aa  428  1e-118  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  58.91 
 
 
388 aa  423  1e-117  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  57.51 
 
 
413 aa  400  9.999999999999999e-111  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  50.13 
 
 
411 aa  340  2.9999999999999998e-92  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  49.22 
 
 
397 aa  335  7e-91  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  49.74 
 
 
393 aa  333  4e-90  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_007948  Bpro_0590  acyl-CoA dehydrogenase-like  44.74 
 
 
414 aa  289  6e-77  Polaromonas sp. JS666  Bacteria  normal  0.882446  normal 
 
 
-
 
NC_009953  Sare_1049  acyl-CoA dehydrogenase domain-containing protein  45.53 
 
 
405 aa  276  3e-73  Salinispora arenicola CNS-205  Bacteria  normal  0.239765  normal  0.0805171 
 
 
-
 
NC_013131  Caci_6321  acyl-CoA dehydrogenase domain protein  45.36 
 
 
383 aa  273  3e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.249622  normal  0.451082 
 
 
-
 
NC_012880  Dd703_3095  acyl-CoA dehydrogenase domain protein  40.16 
 
 
397 aa  266  5e-70  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5525  acyl-CoA dehydrogenase domain protein  44.35 
 
 
397 aa  262  6.999999999999999e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  44.21 
 
 
376 aa  247  2e-64  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007777  Francci3_3276  acyl-CoA dehydrogenase-like  44.74 
 
 
382 aa  244  1.9999999999999999e-63  Frankia sp. CcI3  Bacteria  normal  normal  0.863338 
 
 
-
 
NC_013739  Cwoe_2160  acyl-CoA dehydrogenase domain protein  48.2 
 
 
391 aa  243  3e-63  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.828679 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  43.32 
 
 
376 aa  241  1e-62  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  41.02 
 
 
378 aa  238  1e-61  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  41.32 
 
 
377 aa  233  3e-60  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  41.32 
 
 
376 aa  231  1e-59  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  40.28 
 
 
400 aa  230  4e-59  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_013739  Cwoe_4400  acyl-CoA dehydrogenase domain protein  41.64 
 
 
394 aa  230  4e-59  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2548  acyl-CoA dehydrogenase domain protein  41.92 
 
 
375 aa  228  1e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.314153  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  40.3 
 
 
379 aa  228  1e-58  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  46.32 
 
 
375 aa  228  1e-58  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  37.25 
 
 
388 aa  227  3e-58  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  42.32 
 
 
382 aa  225  8e-58  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  37.25 
 
 
379 aa  225  8e-58  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  41.19 
 
 
375 aa  225  1e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  38.69 
 
 
379 aa  224  1e-57  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_007958  RPD_3106  acyl-CoA dehydrogenase-like  41.62 
 
 
375 aa  225  1e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0271451 
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  38.69 
 
 
379 aa  225  1e-57  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  38.69 
 
 
379 aa  224  2e-57  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  38.69 
 
 
379 aa  224  2e-57  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  38.69 
 
 
379 aa  224  3e-57  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  38.98 
 
 
381 aa  223  3e-57  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  38.68 
 
 
379 aa  223  4e-57  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  38.6 
 
 
379 aa  223  4e-57  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  38.42 
 
 
379 aa  222  7e-57  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  38.42 
 
 
379 aa  222  7e-57  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  38.6 
 
 
379 aa  222  8e-57  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  41.54 
 
 
381 aa  222  8e-57  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1526  acyl-CoA dehydrogenase domain protein  39.01 
 
 
404 aa  222  9.999999999999999e-57  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.84855  n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  38.37 
 
 
386 aa  221  1.9999999999999999e-56  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0656  acyl-CoA dehydrogenase domain-containing protein  39.23 
 
 
380 aa  221  1.9999999999999999e-56  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  42.31 
 
 
376 aa  220  3.9999999999999997e-56  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4666  acyl-CoA dehydrogenase domain-containing protein  42.9 
 
 
375 aa  220  3.9999999999999997e-56  Xanthobacter autotrophicus Py2  Bacteria  normal  0.815528  normal  0.395379 
 
 
-
 
NC_007973  Rmet_0108  acyl-CoA dehydrogenase-like protein  41.62 
 
 
376 aa  219  5e-56  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  38.32 
 
 
417 aa  219  6e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  40.3 
 
 
392 aa  219  7.999999999999999e-56  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4384  acyl-CoA dehydrogenase domain protein  40.3 
 
 
375 aa  219  7.999999999999999e-56  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.17615  normal 
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  43.37 
 
 
379 aa  219  8.999999999999998e-56  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  39.61 
 
 
382 aa  218  1e-55  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  38.68 
 
 
389 aa  218  1e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  35.85 
 
 
379 aa  217  2e-55  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  41.3 
 
 
383 aa  217  2e-55  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4185  acyl-CoA dehydrogenase-like  40.3 
 
 
376 aa  217  2e-55  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  36.13 
 
 
402 aa  217  2.9999999999999998e-55  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  40.9 
 
 
375 aa  217  2.9999999999999998e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  40.06 
 
 
379 aa  217  2.9999999999999998e-55  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0459  acyl-CoA dehydrogenase domain-containing protein  39.52 
 
 
376 aa  217  2.9999999999999998e-55  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3774  acyl-CoA dehydrogenase domain-containing protein  40 
 
 
376 aa  217  2.9999999999999998e-55  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3052  acyl-CoA dehydrogenase domain protein  40 
 
 
376 aa  216  4e-55  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  41.92 
 
 
384 aa  216  7e-55  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_007908  Rfer_3838  acyl-CoA dehydrogenase-like  39.7 
 
 
376 aa  215  8e-55  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  38.87 
 
 
381 aa  215  9e-55  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  43.49 
 
 
384 aa  215  9e-55  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  39.52 
 
 
379 aa  215  9.999999999999999e-55  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  39.22 
 
 
380 aa  215  9.999999999999999e-55  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  38.78 
 
 
382 aa  215  9.999999999999999e-55  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  44.6 
 
 
379 aa  215  9.999999999999999e-55  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  41.1 
 
 
386 aa  214  1.9999999999999998e-54  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  38.76 
 
 
383 aa  214  1.9999999999999998e-54  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  35.85 
 
 
379 aa  214  1.9999999999999998e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  37.37 
 
 
380 aa  214  1.9999999999999998e-54  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  36.75 
 
 
380 aa  214  1.9999999999999998e-54  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_4358  acyl-CoA dehydrogenase domain protein  38.08 
 
 
381 aa  214  1.9999999999999998e-54  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0892384  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  39.29 
 
 
376 aa  213  2.9999999999999995e-54  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  39.16 
 
 
380 aa  213  2.9999999999999995e-54  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2026  acyl-CoA dehydrogenase domain protein  39.51 
 
 
641 aa  214  2.9999999999999995e-54  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000211003  n/a   
 
 
-
 
NC_013131  Caci_4530  acyl-CoA dehydrogenase domain protein  39.7 
 
 
389 aa  213  4.9999999999999996e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.335652  normal  0.412983 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  38.62 
 
 
381 aa  213  5.999999999999999e-54  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  36.89 
 
 
390 aa  213  5.999999999999999e-54  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0124  acyl-CoA dehydrogenase domain protein  41.42 
 
 
376 aa  213  7e-54  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
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