| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2684 |
|---|
| Symbol | |
|---|
| ID | 5355163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2696588 |
|---|
| End bp | 2697715 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640811735 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_001348044 |
|---|
| Protein GI | 152985560 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.126402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCCC GTGAAGAAGA AGTCCAGATC CGCGACATGG CGCGACAGTT CGCCCAGGAG
CGGCTGAAGC CGTTCGCCGC CGACTGGGAC CGCGAGCATC GCTTCCCGGC CGAGGCGATC
CGCGAGATGG CCGACCTCGG TTTCCTTGGC ATGCTGGTGC CGGAGGAGTG GGGCGGCGCG
CAGACCGGGC ACCTGGCCTA CGCCATGGCC CTGGAAGAGA TCGCCGCCGG CGATGGCGCC
TGCTCGACCA TCATGAGCGT GCACAACTCG GTGGGCTGCA TGCCGATCCA CAAGTTCGGC
AGCGCCGAGC AGAAGGAGCG CTTCCTCCGC CAGTTGGCCA CGGGGTCGAT GCTCGGTGCC
TTCGCCCTGA CCGAGCCGCA GGCCGGTTCC GATGCCAGCT TCCTGAAGAC CCGCGCGCGC
CGCGACGGCG ACCACTATGT GCTGAACGGC GCCAAGCAGT TCATCACTTC CGGCAGCCAC
GCGGGGATGG TGATCGTCTT CGCGGTCACC GACCCCGAGG CGGGGAAACG TGGCATCAGC
GCGTTCATCG TGCCCACCGA TACGCCTGGC TACGAGGTGG TGCGGGTCGA GGACAAGCTC
GGCCAGCACG CCTCGGACAC CTGCCAGTTG GCTTTCAACG ACCTGCGCAT CCCGGCTTCG
CTGCGCCTGG GCGAGGAGGG CGAGGGCTAT CGCATCGCCC TGGCCAACCT CGAAGGCGGC
CGCATCGGCA TCGCCGCCCA GGCGGTCGGC ATGGCGCGCG CGGCGTTCGA GGCGGCGCGC
GACTACGCCC ATGAGCGGGA AACCTTCGGC AAGCCGATCA TCGAACACCA GGCAGTGGCC
TTCCGCCTCG CCGACATGGC CACCCGTATC GCCGTGGCGC GGCAGATGGT CCACCACGCC
GCCAGCCTGC GCGAAGCCGG CCTGCCGTGC CTGACCGAAG CCTCGATGGC CAAGCTGTTC
GCCTCGGAGA TGGCCGAGGA GGTCTGCTCC GCGGCGATCC AGACCCTCGG CGGCTACGGC
TATCTCAAGG ACTTCCCGGT GGAGCGCATC TATCGGGACG TGCGGGTCTG CCAGATCTAC
GAGGGCACCA GCGACGTGCA GCGCCTGGTG ATCGCGCGCA GCCTGTAG
|
|---|
| Protein sequence | MIPREEEVQI RDMARQFAQE RLKPFAADWD REHRFPAEAI REMADLGFLG MLVPEEWGGA
QTGHLAYAMA LEEIAAGDGA CSTIMSVHNS VGCMPIHKFG SAEQKERFLR QLATGSMLGA
FALTEPQAGS DASFLKTRAR RDGDHYVLNG AKQFITSGSH AGMVIVFAVT DPEAGKRGIS
AFIVPTDTPG YEVVRVEDKL GQHASDTCQL AFNDLRIPAS LRLGEEGEGY RIALANLEGG
RIGIAAQAVG MARAAFEAAR DYAHERETFG KPIIEHQAVA FRLADMATRI AVARQMVHHA
ASLREAGLPC LTEASMAKLF ASEMAEEVCS AAIQTLGGYG YLKDFPVERI YRDVRVCQIY
EGTSDVQRLV IARSL
|
|---|
| |