| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5041 |
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| Symbol | |
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| ID | 7974159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5362442 |
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| End bp | 5363635 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795634 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002946909 |
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| Protein GI | 239817999 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCCA AGATCCCCGC ACCGCCCTCG ACAACGCACC TCGCGCTGCC GTTCTTCGAT
GACGCGCATC GCGCGCTCGC AAGCGAGCTG CTGCCCTGGT GCGCCGCGCA GGAAGTCGAC
GAGCGCGACG ACCGCGCGGC CTGCCGCGAA TGGGTGCGCC GCCTCGGCGA CGGCGGCTGG
CTGCGCTATG CCGTGCCCGG CAGCGCTGGC GGCGCGCTGG AGCGCCTCGA CTCACGCGCG
CTCGTGCTGC TGCGCGAGAC GCTCGGCTAC CACTCGCCGC TGGCGGACTT CGCGTTTGCG
ATGCAGGGGC TGGGCAGCGG CGCGATCACG CTCGCGGGCA CGCCCGAGCA GCAGTCGCAC
TACCTCACAG CTGTGGGCAA GGGCGAGAAG ATCGCGGCCT TTGCGCTGAG CGAACCCGAT
GCGGGCTCCG ACGTGGCGGC CATGGCGATG CGCGCCGAAG CCACGCCCGA CGGCTGGCGC
CTCAACGGCG AGAAGACCTG GATCAGCAAC GGCGGCATCG CCGACTTCTA TTGCCTGTTC
GCGAAGACCG ATCCGACGGG AGGCACGCGC GGCATTACCG TCTTCATCGT CGACGCGACC
ACGCCCGGAC TCGACACCTC CGAGCACATC GACGTGATGG CGCCGCACCC GCTCGCCACG
CTGCGCTTCC AGGACTGCAT CGTGCCGCGC GCGGCGCAGC TCGGCGAACT CAACGGTGGT
TTCAAGCTCG CGATGCGCAC GCTCGACATC TTCCGTGCCT CCGTTGCAGC GGCGGCATTG
GGCATGGGAC GCCGCGCGCT CGCCGAAGCC ATCGCGCATG CAAAGGGCCG GCGCATGTTC
GGCCAGACGC TCGCCGATTT CCAGCTCACG CAGGCCAAGC TCGGCGAGAT GGCCGCGCTG
ATCGACAGCG CCGCATTGCT CACCTACCGC GCCGCATGGA TGCGCGACGA TGCCGAACAG
CGCGGCGCTC CCGCGGTGGG CGACGTGTCG GCCGCCGCGG CCATGGCCAA GATGTGCGCC
ACCGAGAACG CGAGCCGCGT GATCGACATG GCGCTGCAGA TGCACGGCGG CCTTGGCGTG
AAGGTTGGCA CGAAGATTGA AAGCCTCTAC CGCGACATCC GCTCGCTGCG CATCTACGAA
GGCGCGACGG AGGTTCAGCA ACTGATCATC GGCAAATCCG TTTTGCGGGG ATAA
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| Protein sequence | MMAKIPAPPS TTHLALPFFD DAHRALASEL LPWCAAQEVD ERDDRAACRE WVRRLGDGGW
LRYAVPGSAG GALERLDSRA LVLLRETLGY HSPLADFAFA MQGLGSGAIT LAGTPEQQSH
YLTAVGKGEK IAAFALSEPD AGSDVAAMAM RAEATPDGWR LNGEKTWISN GGIADFYCLF
AKTDPTGGTR GITVFIVDAT TPGLDTSEHI DVMAPHPLAT LRFQDCIVPR AAQLGELNGG
FKLAMRTLDI FRASVAAAAL GMGRRALAEA IAHAKGRRMF GQTLADFQLT QAKLGEMAAL
IDSAALLTYR AAWMRDDAEQ RGAPAVGDVS AAAAMAKMCA TENASRVIDM ALQMHGGLGV
KVGTKIESLY RDIRSLRIYE GATEVQQLII GKSVLRG
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