Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02011 |
Symbol | RSp0036 |
ID | 1222584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 41397 |
End bp | 42596 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637239895 |
Product | acyl-CoA dehydrogenase oxidoreductase protein |
Protein accession | NP_521597 |
Protein GI | 17548257 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC TGGACTACCT GCAGTGGCCC TTCTTCGATG ACCGGCATCG CGGCCTGGCG GCCGAGCTCG ATGCCTGGGC AGCCGAACAC ATTCCGCACG GCCACGGCGC CGATGTCGAT GCCGAATGCC GCGCGCTGGT GCGCCTGCTG GGCGAGGCCG GCTGGCTGCG CCACGCGGTG GGCGGCACGG CCCATGGCGG CGCCGGCGAG ACCATCGACA CGCGCGCCAT CTGCTTGATC CGCGAGACGC TGGCGCGCCA CTCGGGCCTG GCCGATTTCG CGTTCGCGAT GCAGGGGCTG GGCTCCGGCG CGATTTCGCT GCACGGCACG CCGGCGCAGC GCGCGCGCTA CCTGGCGAAG GTGGCGCGCG GCGAGGCCAT CGCCGCGTTC GCGCTGTCCG AGCCCGAGGC CGGCTCCGAC GTGGCCGCCA TGGCGTGCGC CGCGCGCGCG GACGGCGACA GCTACGTGCT CGACGGCGAG AAGACGTGGA TCTCCAACGG CGGCATCGCC GATTTCTACG TCGTCTTCGC CCGCACCGGC GAGGCGCCGG GCGCGCGCGG CATCAGCGCG TTCATCGTCG AGGCGGGCAC GCCGGGCTTC GAGATCGCCG AGCGCATCGA CGTGATCGCG CCGCATCCGC TGGCGCGCCT GCGCTTCACC GATTGCCGCA TCCCGGCCGG CCAGCGCGTG GGCGCGGCCG GCGAGGGCTT CAAGGTGGCG ATGCGCACGC TGGACGTGTT CCGCACCTCG GTGGCCGCCG CCGCGCTCGG CTTCGCGCGC CGCGCGCTGG ACGAAGCGCT GGCGCGCGCC ACCACCCGCA AGATGTTCAA CGGCGTGCTG GCCGACTTCC AGCTCACGCA GGCCAAGCTC GCGCAGATGG CCACCGCCAT CGACAGCGCC GCGCTGCTGA CCTACCGCGC CGCGTGGCAG CGCGACCAGG GCCGCAGCGT CACGCGCGAG GCCGCCATGG CCAAGATGAC CGCCACCGAG AACGCCCAGC AGGTGATCGA CGCCGCCGTG CAGATGTGGG GCGGCCTGGG CGTGGTCAGC GAGCAGCCGG TCGAGCGCCT GTACCGCGAG ATCCGCGCGC TGCGCATCTA CGAAGGCGCG ACCGAGGTGC AGCAGCTCAT CATCGCGCGC GACCTGCTGC GCCATGCGGC CCAGGGCACG GCCCCGGCTG CTGCCGCCAC CGCGTCTTGA
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Protein sequence | MSDLDYLQWP FFDDRHRGLA AELDAWAAEH IPHGHGADVD AECRALVRLL GEAGWLRHAV GGTAHGGAGE TIDTRAICLI RETLARHSGL ADFAFAMQGL GSGAISLHGT PAQRARYLAK VARGEAIAAF ALSEPEAGSD VAAMACAARA DGDSYVLDGE KTWISNGGIA DFYVVFARTG EAPGARGISA FIVEAGTPGF EIAERIDVIA PHPLARLRFT DCRIPAGQRV GAAGEGFKVA MRTLDVFRTS VAAAALGFAR RALDEALARA TTRKMFNGVL ADFQLTQAKL AQMATAIDSA ALLTYRAAWQ RDQGRSVTRE AAMAKMTATE NAQQVIDAAV QMWGGLGVVS EQPVERLYRE IRALRIYEGA TEVQQLIIAR DLLRHAAQGT APAAAATAS
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