More than 300 homologs were found in PanDaTox collection
for query gene Rpic_3835 on replicon NC_010678
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  91.93 
 
 
399 aa  701    Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  100 
 
 
391 aa  792    Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  100 
 
 
391 aa  792    Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  80.52 
 
 
389 aa  625  1e-178  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  72.66 
 
 
404 aa  572  1.0000000000000001e-162  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  72.7 
 
 
401 aa  562  1.0000000000000001e-159  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  71.95 
 
 
402 aa  542  1e-153  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  72.75 
 
 
402 aa  541  9.999999999999999e-153  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2181  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  70.88 
 
 
389 aa  535  1e-151  Ralstonia eutropha JMP134  Bacteria  normal  0.594963  n/a   
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  69.92 
 
 
389 aa  536  1e-151  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  69.85 
 
 
388 aa  508  1e-143  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  69.27 
 
 
391 aa  505  9.999999999999999e-143  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  62.63 
 
 
390 aa  495  1e-139  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  63.05 
 
 
383 aa  478  1e-133  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  65.89 
 
 
398 aa  473  1e-132  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  60.57 
 
 
393 aa  452  1.0000000000000001e-126  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  60.56 
 
 
391 aa  454  1.0000000000000001e-126  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_011894  Mnod_1203  acyl-CoA dehydrogenase domain protein  60.98 
 
 
381 aa  444  1e-123  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  62.18 
 
 
413 aa  441  1e-123  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_008044  TM1040_2239  acyl-CoA dehydrogenase-like  59.59 
 
 
384 aa  439  9.999999999999999e-123  Ruegeria sp. TM1040  Bacteria  normal  0.708615  normal 
 
 
-
 
NC_008688  Pden_5091  acyl-CoA dehydrogenase domain-containing protein  60.42 
 
 
378 aa  438  9.999999999999999e-123  Paracoccus denitrificans PD1222  Bacteria  normal  0.580305  normal 
 
 
-
 
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  61.5 
 
 
397 aa  437  1e-121  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  59.38 
 
 
393 aa  417  9.999999999999999e-116  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  58.54 
 
 
411 aa  408  1e-113  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_007948  Bpro_0590  acyl-CoA dehydrogenase-like  55.58 
 
 
414 aa  379  1e-104  Polaromonas sp. JS666  Bacteria  normal  0.882446  normal 
 
 
-
 
NC_012880  Dd703_3095  acyl-CoA dehydrogenase domain protein  45.05 
 
 
397 aa  301  2e-80  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6321  acyl-CoA dehydrogenase domain protein  46.65 
 
 
383 aa  293  5e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.249622  normal  0.451082 
 
 
-
 
NC_009953  Sare_1049  acyl-CoA dehydrogenase domain-containing protein  46.15 
 
 
405 aa  285  1.0000000000000001e-75  Salinispora arenicola CNS-205  Bacteria  normal  0.239765  normal  0.0805171 
 
 
-
 
NC_013131  Caci_5525  acyl-CoA dehydrogenase domain protein  45.56 
 
 
397 aa  271  2e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3276  acyl-CoA dehydrogenase-like  45.9 
 
 
382 aa  257  2e-67  Frankia sp. CcI3  Bacteria  normal  normal  0.863338 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  45.51 
 
 
379 aa  250  3e-65  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4400  acyl-CoA dehydrogenase domain protein  42.61 
 
 
394 aa  249  8e-65  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  44.89 
 
 
380 aa  247  2e-64  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  42.63 
 
 
386 aa  245  9.999999999999999e-64  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
376 aa  244  1.9999999999999999e-63  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  44.11 
 
 
384 aa  243  3e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  44.11 
 
 
384 aa  243  3.9999999999999997e-63  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  42.9 
 
 
379 aa  243  3.9999999999999997e-63  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  45.39 
 
 
384 aa  243  5e-63  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  41.98 
 
 
379 aa  242  6e-63  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  41.98 
 
 
379 aa  242  6e-63  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  38.56 
 
 
386 aa  241  1e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  40.92 
 
 
400 aa  241  1e-62  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  38.24 
 
 
417 aa  241  2e-62  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  42.59 
 
 
379 aa  240  2.9999999999999997e-62  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_013757  Gobs_4353  acyl-CoA dehydrogenase domain protein  41.27 
 
 
385 aa  240  4e-62  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  42.43 
 
 
379 aa  239  5.999999999999999e-62  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  42.43 
 
 
379 aa  238  1e-61  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  42.76 
 
 
379 aa  238  1e-61  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  41.8 
 
 
379 aa  238  1e-61  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  42.76 
 
 
379 aa  238  2e-61  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2160  acyl-CoA dehydrogenase domain protein  47.73 
 
 
391 aa  238  2e-61  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.828679 
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  42.76 
 
 
379 aa  238  2e-61  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  45.39 
 
 
398 aa  238  2e-61  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  45.08 
 
 
384 aa  238  2e-61  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  38.5 
 
 
389 aa  238  2e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4530  acyl-CoA dehydrogenase domain protein  42.24 
 
 
389 aa  237  3e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.335652  normal  0.412983 
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  42.43 
 
 
379 aa  236  4e-61  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  43.06 
 
 
388 aa  236  5.0000000000000005e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  42.43 
 
 
379 aa  236  5.0000000000000005e-61  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  42.43 
 
 
379 aa  236  6e-61  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  42.43 
 
 
379 aa  236  6e-61  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  38.9 
 
 
380 aa  236  6e-61  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  45.21 
 
 
383 aa  236  7e-61  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  42.17 
 
 
379 aa  236  7e-61  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  40.62 
 
 
388 aa  236  7e-61  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_013061  Phep_0136  acyl-CoA dehydrogenase domain protein  40.47 
 
 
379 aa  235  8e-61  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  39.94 
 
 
381 aa  235  1.0000000000000001e-60  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3827  bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)  41.8 
 
 
379 aa  234  1.0000000000000001e-60  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  43.21 
 
 
382 aa  234  1.0000000000000001e-60  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_013730  Slin_5641  Butyryl-CoA dehydrogenase  40.47 
 
 
379 aa  234  2.0000000000000002e-60  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  44.44 
 
 
379 aa  234  2.0000000000000002e-60  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2300  acyl-CoA dehydrogenase domain-containing protein  37.24 
 
 
414 aa  234  2.0000000000000002e-60  Roseiflexus sp. RS-1  Bacteria  normal  0.242601  normal 
 
 
-
 
NC_012791  Vapar_4730  acyl-CoA dehydrogenase domain protein  40.19 
 
 
376 aa  234  2.0000000000000002e-60  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  42.81 
 
 
392 aa  234  2.0000000000000002e-60  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  44.91 
 
 
375 aa  234  2.0000000000000002e-60  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  42.11 
 
 
379 aa  234  2.0000000000000002e-60  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0876  acyl-CoA dehydrogenase domain-containing protein  41.8 
 
 
387 aa  233  3e-60  Salinispora arenicola CNS-205  Bacteria  normal  0.189497  normal  0.119821 
 
 
-
 
NC_009767  Rcas_3165  acyl-CoA dehydrogenase domain-containing protein  36.98 
 
 
445 aa  233  5e-60  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.256023  normal 
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  42.28 
 
 
383 aa  233  5e-60  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_014150  Bmur_2026  acyl-CoA dehydrogenase domain protein  39.9 
 
 
641 aa  232  7.000000000000001e-60  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000211003  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  41.19 
 
 
376 aa  232  9e-60  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  41.19 
 
 
376 aa  232  9e-60  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  37.05 
 
 
381 aa  232  9e-60  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  41.85 
 
 
381 aa  231  1e-59  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  36.79 
 
 
381 aa  231  1e-59  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  38.22 
 
 
394 aa  231  1e-59  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  42.96 
 
 
380 aa  231  1e-59  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  37.4 
 
 
376 aa  231  2e-59  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  37.4 
 
 
376 aa  231  2e-59  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  39.07 
 
 
379 aa  231  2e-59  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  40.77 
 
 
395 aa  231  2e-59  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_06620  butyryl-CoA dehydrogenase  39.3 
 
 
380 aa  231  2e-59  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  37.4 
 
 
376 aa  231  2e-59  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  41.49 
 
 
379 aa  230  3e-59  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_009636  Smed_2175  acyl-CoA dehydrogenase domain-containing protein  42.94 
 
 
386 aa  230  3e-59  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  43.99 
 
 
379 aa  230  4e-59  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  37.4 
 
 
376 aa  230  4e-59  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  43.34 
 
 
385 aa  230  4e-59  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  43.34 
 
 
385 aa  230  4e-59  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
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