| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3165 |
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| Symbol | |
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| ID | 5540663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4108519 |
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| End bp | 4109856 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895286 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001433237 |
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| Protein GI | 156743108 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.256023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAGA GGAAAGGGAG TCCCCACACC CTATTCCCTA ACCCTGTTCC TGGTTCTCAG
TTCTTAGTTC TTGGTTCTTC AGGAGAAAAG ACGATGGATT TCACCGCTAA CTACGACATG
TTCCTGACCG AGGAACACCA GATTCTGCGC CGCACCGTGC GCGAATTCGC CGAGAAGGAA
GTCGCTCCCT TCATCCGTGA ATGGGATCGC AGCGGCGCAG CGATGGAAGG ACCGGAGACC
CGCCCCCACA TCCGCCCCAT TCTGAAGCGC ATGGGCGAAT TGGGGCTGCT CGGCATCTGC
CTGCCTGCAC GTCTTGGCGG CGCAGGAATG GACTACCTGG CGCTGGCGGT CGTATGCGAG
GAACTAGAGC GGGTCGACAG TTTCCTGCGG GTTGTTATGA GCGTCCACAC CGGTTTGAAC
TCGCTGACAC TGTTTCAGTG GGGAACGGAA GAACAACAGC GGAAATACTT GATTCCGCAG
GCGAAAGGCG AAAAAATCGC CGCCTACTGT CTGACCGAAC CGAACAGCGG CACCGATGCC
GGCGCCATGC TCGCCACTGC GCGACGCGAC GGCGACTCCT ATATCCTGAA CGGCGAGAAA
ACCTGGATCA GCCTGGCAGA CATCGCCGAC AACTTTCTGG TCTTTGCCAA GACCGACCCA
TCGAAGGGAA ATCGGGGCAT TTCGTGTTTC ATTGTCGAAC GCACCATGCC TGGCTTCAGT
AGCCTCCCGA TCCACGGCAA ACTCGGCGTG CGCGCCGGGA ACACCGGTTC GGTCATCCTG
GAAGATGTGC GCGTACCGGT CGCCAACCGA CTCGGCGAAG AGGGCGAAGG TTTTAAGATC
GCCATGACCG CCCTCGACAA TGGGCGCTAC ACGGTCGCAG CCGGTGCGAC CGGTCTCATT
CAGGCGAGCC TGGAAGCCAG CATTCGCTAC GCGCAAGAAC GCCAGACCTT TGGCGTACCA
ATCGCCGAGC ATCAACTGGT CAAACGCATG ATCAGCCACA TGGTGCGTAA ACTCGACACC
AGCCGCCTGT TGGTGTACCG TGCTGGCTGG ATGAAAAACC AGGGACGCCG CAATACGCGC
GAAACGACCC TCGCCAAATG GCATGCCACG GTCAGCAGTT TTGAGGCTGC CGACGATGCG
ATCCAGATCC ACGGCGCCTA TGGCTACAGC GACGAATATC CCGTCGAACG CTACCTGCGC
AACGCGCGCG GCGCCATCAT CTACGAAGGC ACGCGCGAAT TGCAGGAACT GCTTCAGGCG
GATTTCGCGC TCGGCTTCCG CGAAAATAAG CCGCTGCGCC GCGAGTTGCC CGCCTACGAT
CCAGATGCAT GGGCATGA
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| Protein sequence | MRKRKGSPHT LFPNPVPGSQ FLVLGSSGEK TMDFTANYDM FLTEEHQILR RTVREFAEKE
VAPFIREWDR SGAAMEGPET RPHIRPILKR MGELGLLGIC LPARLGGAGM DYLALAVVCE
ELERVDSFLR VVMSVHTGLN SLTLFQWGTE EQQRKYLIPQ AKGEKIAAYC LTEPNSGTDA
GAMLATARRD GDSYILNGEK TWISLADIAD NFLVFAKTDP SKGNRGISCF IVERTMPGFS
SLPIHGKLGV RAGNTGSVIL EDVRVPVANR LGEEGEGFKI AMTALDNGRY TVAAGATGLI
QASLEASIRY AQERQTFGVP IAEHQLVKRM ISHMVRKLDT SRLLVYRAGW MKNQGRRNTR
ETTLAKWHAT VSSFEAADDA IQIHGAYGYS DEYPVERYLR NARGAIIYEG TRELQELLQA
DFALGFRENK PLRRELPAYD PDAWA
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