More than 300 homologs were found in PanDaTox collection
for query gene Francci3_3276 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_3276  acyl-CoA dehydrogenase-like  100 
 
 
382 aa  741    Frankia sp. CcI3  Bacteria  normal  normal  0.863338 
 
 
-
 
NC_009953  Sare_1049  acyl-CoA dehydrogenase domain-containing protein  59.74 
 
 
405 aa  398  9.999999999999999e-111  Salinispora arenicola CNS-205  Bacteria  normal  0.239765  normal  0.0805171 
 
 
-
 
NC_013131  Caci_6321  acyl-CoA dehydrogenase domain protein  57.56 
 
 
383 aa  352  4e-96  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.249622  normal  0.451082 
 
 
-
 
NC_012880  Dd703_3095  acyl-CoA dehydrogenase domain protein  46.98 
 
 
397 aa  314  1.9999999999999998e-84  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  47.95 
 
 
391 aa  313  3.9999999999999997e-84  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  48.41 
 
 
383 aa  308  2.0000000000000002e-82  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  46.88 
 
 
391 aa  298  1e-79  Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  46.88 
 
 
391 aa  298  1e-79  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  46.92 
 
 
390 aa  295  7e-79  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  46.51 
 
 
402 aa  292  6e-78  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  47.03 
 
 
399 aa  289  4e-77  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  46.11 
 
 
404 aa  289  5.0000000000000004e-77  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_008044  TM1040_2239  acyl-CoA dehydrogenase-like  45.67 
 
 
384 aa  289  6e-77  Ruegeria sp. TM1040  Bacteria  normal  0.708615  normal 
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  47.24 
 
 
389 aa  289  6e-77  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  44.88 
 
 
401 aa  288  8e-77  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  45.07 
 
 
402 aa  286  4e-76  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  43.57 
 
 
393 aa  281  1e-74  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_011894  Mnod_1203  acyl-CoA dehydrogenase domain protein  47 
 
 
381 aa  280  3e-74  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2181  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.77 
 
 
389 aa  278  8e-74  Ralstonia eutropha JMP134  Bacteria  normal  0.594963  n/a   
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  45.12 
 
 
391 aa  275  1.0000000000000001e-72  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  43.37 
 
 
389 aa  274  2.0000000000000002e-72  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  44.33 
 
 
398 aa  273  5.000000000000001e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  47.84 
 
 
413 aa  270  2.9999999999999997e-71  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_008688  Pden_5091  acyl-CoA dehydrogenase domain-containing protein  47.18 
 
 
378 aa  266  7e-70  Paracoccus denitrificans PD1222  Bacteria  normal  0.580305  normal 
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  46.39 
 
 
388 aa  260  2e-68  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_013739  Cwoe_4400  acyl-CoA dehydrogenase domain protein  42.07 
 
 
394 aa  243  5e-63  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2160  acyl-CoA dehydrogenase domain protein  51.13 
 
 
391 aa  235  1.0000000000000001e-60  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.828679 
 
 
-
 
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  41.86 
 
 
397 aa  228  1e-58  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  39.75 
 
 
411 aa  221  1.9999999999999999e-56  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_013131  Caci_5525  acyl-CoA dehydrogenase domain protein  43.28 
 
 
397 aa  218  8.999999999999998e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  38.9 
 
 
393 aa  216  5e-55  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_008782  Ajs_3774  acyl-CoA dehydrogenase domain-containing protein  36.24 
 
 
376 aa  213  5.999999999999999e-54  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3052  acyl-CoA dehydrogenase domain protein  35.98 
 
 
376 aa  211  2e-53  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  39.64 
 
 
377 aa  209  6e-53  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4730  acyl-CoA dehydrogenase domain protein  37.61 
 
 
376 aa  206  6e-52  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  40.3 
 
 
375 aa  204  1e-51  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  36.18 
 
 
376 aa  204  3e-51  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  42.35 
 
 
375 aa  203  4e-51  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  40 
 
 
375 aa  202  7e-51  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  38.6 
 
 
380 aa  202  9.999999999999999e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_1777  putative acyl-CoA dehydrogenase  41.74 
 
 
383 aa  201  1.9999999999999998e-50  Thermobifida fusca YX  Bacteria  normal  0.0345355  n/a   
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  35.19 
 
 
400 aa  201  1.9999999999999998e-50  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_008752  Aave_4365  acyl-CoA dehydrogenase domain-containing protein  36.24 
 
 
376 aa  201  1.9999999999999998e-50  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3174  acyl-CoA dehydrogenase domain-containing protein  39.18 
 
 
383 aa  200  3e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.0000929019  hitchhiker  0.000000000938929 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  38.6 
 
 
379 aa  200  3e-50  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3838  acyl-CoA dehydrogenase-like  35.9 
 
 
376 aa  200  3.9999999999999996e-50  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  37.96 
 
 
382 aa  199  9e-50  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  36.42 
 
 
378 aa  199  1.0000000000000001e-49  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  39.35 
 
 
382 aa  198  1.0000000000000001e-49  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  38.1 
 
 
376 aa  198  1.0000000000000001e-49  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_008781  Pnap_0459  acyl-CoA dehydrogenase domain-containing protein  36.47 
 
 
376 aa  198  1.0000000000000001e-49  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  40.93 
 
 
375 aa  196  4.0000000000000005e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  37.2 
 
 
376 aa  196  5.000000000000001e-49  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  37.89 
 
 
379 aa  195  1e-48  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  37.5 
 
 
376 aa  194  2e-48  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4666  acyl-CoA dehydrogenase domain-containing protein  39.65 
 
 
375 aa  194  2e-48  Xanthobacter autotrophicus Py2  Bacteria  normal  0.815528  normal  0.395379 
 
 
-
 
NC_009379  Pnuc_1555  acyl-CoA dehydrogenase domain-containing protein  35.59 
 
 
383 aa  194  2e-48  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  39.64 
 
 
418 aa  194  2e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  36 
 
 
383 aa  194  3e-48  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  37.31 
 
 
383 aa  193  4e-48  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4185  acyl-CoA dehydrogenase-like  34.76 
 
 
376 aa  192  6e-48  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  38.24 
 
 
384 aa  192  6e-48  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_010511  M446_2476  acyl-CoA dehydrogenase domain-containing protein  38.4 
 
 
380 aa  192  7e-48  Methylobacterium sp. 4-46  Bacteria  normal  0.893721  normal  0.185436 
 
 
-
 
NC_011368  Rleg2_4384  acyl-CoA dehydrogenase domain protein  40.21 
 
 
375 aa  192  7e-48  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.17615  normal 
 
 
-
 
NC_007333  Tfu_1282  putative acyl-CoA dehydrogenase  38.71 
 
 
392 aa  192  1e-47  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  37.05 
 
 
384 aa  191  2e-47  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  36.45 
 
 
384 aa  191  2e-47  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007948  Bpro_0590  acyl-CoA dehydrogenase-like  36.88 
 
 
414 aa  191  2e-47  Polaromonas sp. JS666  Bacteria  normal  0.882446  normal 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  36.45 
 
 
384 aa  191  2e-47  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_002947  PP_3492  acyl-CoA dehydrogenase domain-containing protein  35.17 
 
 
383 aa  190  2.9999999999999997e-47  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  37.03 
 
 
388 aa  190  2.9999999999999997e-47  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1570  acyl-CoA dehydrogenase domain protein  40.91 
 
 
383 aa  190  2.9999999999999997e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2436  acyl-CoA dehydrogenase domain-containing protein  35.47 
 
 
383 aa  190  2.9999999999999997e-47  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  42.7 
 
 
382 aa  190  4e-47  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_011894  Mnod_2176  acyl-CoA dehydrogenase domain protein  38.01 
 
 
380 aa  190  4e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.110006  n/a   
 
 
-
 
NC_009512  Pput_2279  acyl-CoA dehydrogenase domain-containing protein  35.17 
 
 
383 aa  189  5e-47  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  35.42 
 
 
376 aa  189  5.999999999999999e-47  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  35.42 
 
 
376 aa  189  5.999999999999999e-47  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2258  acyl-CoA dehydrogenase domain-containing protein  39.08 
 
 
380 aa  189  5.999999999999999e-47  Salinispora tropica CNB-440  Bacteria  normal  0.157301  normal  0.10942 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  35.1 
 
 
381 aa  189  8e-47  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  36.93 
 
 
381 aa  188  1e-46  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6302  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  36.42 
 
 
378 aa  188  1e-46  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4257  butyryl-CoA dehydrogenase  37.9 
 
 
377 aa  188  1e-46  Ralstonia eutropha JMP134  Bacteria  normal  0.725306  n/a   
 
 
-
 
NC_009428  Rsph17025_1335  acyl-CoA dehydrogenase domain-containing protein  39.93 
 
 
379 aa  188  1e-46  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.254429  normal  0.854455 
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  35.4 
 
 
381 aa  188  1e-46  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  37.22 
 
 
392 aa  188  1e-46  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  37.72 
 
 
384 aa  189  1e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_010682  Rpic_0124  acyl-CoA dehydrogenase domain protein  38.67 
 
 
376 aa  187  2e-46  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  37.35 
 
 
398 aa  187  2e-46  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  35.42 
 
 
376 aa  187  2e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0108  acyl-CoA dehydrogenase-like protein  37.94 
 
 
376 aa  188  2e-46  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  35.42 
 
 
376 aa  187  2e-46  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_013159  Svir_33630  acyl-CoA dehydrogenase  38.28 
 
 
386 aa  188  2e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.732719 
 
 
-
 
NC_010678  Rpic_3973  acyl-CoA dehydrogenase domain protein  36.93 
 
 
377 aa  187  3e-46  Ralstonia pickettii 12J  Bacteria  normal  0.78306  normal  0.788161 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  35.63 
 
 
376 aa  187  3e-46  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2548  acyl-CoA dehydrogenase domain protein  38.6 
 
 
375 aa  187  3e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.314153  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  35.63 
 
 
381 aa  187  3e-46  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0132  acyl-CoA dehydrogenase domain protein  38.67 
 
 
376 aa  187  3e-46  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3106  acyl-CoA dehydrogenase domain-containing protein  38.67 
 
 
375 aa  187  3e-46  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.332334  n/a   
 
 
-
 
NC_012857  Rpic12D_4086  acyl-CoA dehydrogenase domain protein  36.93 
 
 
377 aa  187  3e-46  Ralstonia pickettii 12D  Bacteria  normal  0.303595  normal  0.349393 
 
 
-
 
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