| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4365 |
|---|
| Symbol | |
|---|
| ID | 4668764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4850497 |
|---|
| End bp | 4851627 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639825551 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_972679 |
|---|
| Protein GI | 120613001 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTGA CCCAGGACCA GGAGATGATC CGCGACGCGG TGCGCGAGTT CGCGCAGACG
GAGCTGTGGC CGCATGCGGC CCGCTGGGAC AAGGAGCACC TGTTTCCCCG CGATGCGCAC
CGCGGCCTCG CCGCGCTGGG GGCGTATGGC ATTTGCGTGC CGGAGGAGTA CGGCGGCGCA
GGGCTGGACT ACCTGTCGCT GGCACTGGTT CTGGAGGAAA TCGCGGCAGG CGACGGTGGC
ACGAGCACGG CGATCAGCGT GACCAACTGT CCGGTCAATG CGATCCTGAT GCGCTACGGC
AGCGAGGCGC AGAAGCGCCG GTGGCTCGAG CCCCTGGCGC GCGGCGAGAT GCTGGGGGCT
TTCTGCCTGA CGGAGCCCCA CGTCGGCTCG GATGCCTCGG CGCTGCGTAC CACGGCGGTG
CGGCATGGGG ACGAATACGC CATCGACGGC GTGAAGCAGT TCATCACGAG CGGCAGGAAT
GGCCAGGTGG CGATCGTGAT CGCGGTGACC GACCGTGCCG CCGGCAAGCG CGGCATGAGC
GCATTCCTCG TGCCCACCGA CACCCCCGGC TACGTCGTGG CGCGGCTGGA GGACAAGCTG
GGCCAGCGCA GCAGCGATAC GGCGCAGATC ATGTTCGAGG GATGCCGCAT CCCGGTGGAG
AACCGGATCG GCGCAGAGGG CGAGGGCTAC AAGATCGCGC TGGGCGCTCT GGAAGGGGGG
CGCATCGGCA TCGCGGCGCA GAGCGTGGGC ATGGCGCGCA GCGCCTTCGA CGTGGCCGTG
CAGTATGCGA AGGAGCGCGA GAGTTTCGGC CAGCCGATCT TCCAGCACCA AGCCGTGGGA
TTCCGGCTGG CCGATTGCGC CACGCAGCTC GAGGCCGCTC GCCAACTGAT CTGGCATGCG
GCGACCCTGC GGGACGCGGG GCGCCCCTGC CTGAAGGAGG CCGCCATGGC CAAGCTGTTC
GCGAGCGAGA TGGCCGAGCG CGTGTGCAGC GCAGCCATAC AGACGCTGGG ATGGTACGGC
GTGGTCAACG ACTTCCCGGT AGAACGCATC TACCGCGACG TGCGCGTGTG CCAGATCTAC
GAGGGCACGA GCGACGTGCA GAAGATTCTC ATCACCCGCG CGCTGGCCTG A
|
|---|
| Protein sequence | MLLTQDQEMI RDAVREFAQT ELWPHAARWD KEHLFPRDAH RGLAALGAYG ICVPEEYGGA
GLDYLSLALV LEEIAAGDGG TSTAISVTNC PVNAILMRYG SEAQKRRWLE PLARGEMLGA
FCLTEPHVGS DASALRTTAV RHGDEYAIDG VKQFITSGRN GQVAIVIAVT DRAAGKRGMS
AFLVPTDTPG YVVARLEDKL GQRSSDTAQI MFEGCRIPVE NRIGAEGEGY KIALGALEGG
RIGIAAQSVG MARSAFDVAV QYAKERESFG QPIFQHQAVG FRLADCATQL EAARQLIWHA
ATLRDAGRPC LKEAAMAKLF ASEMAERVCS AAIQTLGWYG VVNDFPVERI YRDVRVCQIY
EGTSDVQKIL ITRALA
|
|---|
| |