Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3174 |
Symbol | |
ID | 8884373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3355962 |
End bp | 3357113 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_003511938 |
Protein GI | 291300660 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000929019 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000938929 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTGTGC AACGTTTTTT CCCTAGCGAC GAGGCTAGGG CCATTGTGGA GTTGGCGCGG GATATCGCCG AGGGCGAGTT GGCGCCGCGG GTGAACGAGT TCGAGGCGCG GGGTGAGTTC CCGCGGGAGG TGTTGCGCAA GCTGGGCGCG GCGGGGTTCC TGGGTCTGCC GTACCCGGAG CGCTACGGGG GCGGCGGGCA GCCGTATGAG GTGTACCTGC AGGTGCTGGA GGAGCTGGCC TACCGGTGGG TGGTGGTGGC CGAGGCGGTC AGTGTGCACA CTCTGGCGTG TTTCCCGGTG GCGGAGTTCG GCACCGACGC GCAGCGCGAG CGGTGGTTGC CTCAGATGGT GGGTGGGGAC ACGTTGGGTG CCTACTGTCT GACGGAGCCG TCGGGTGGTT CGGACGCGGC GTCGTTGTCG ACGAAGGCGG TGCGTGACGG GGACGGGTTC GTGGTGGAGG GGACGAAGGC GTTCATCACG CACGCGGGGG TGGCGGATTT TCATTCGGTG TTCGCGCGCA CGGGTGGTCC GGGTGCCCGG GGGGTGTCGT GTCTGGTGCT GCCGGAGGGT ACGCCGGGGG TGGTGCCGCA GCGGCTGGAG CACAAGATGG GGTTGAGTGC GTCGCCCACG GCGCAGATCG TGTTCGATGG GGCTCGGGTG GGTTCTGATT GTCTGGTGGG TGAGGAGGGT CGGGGTTTTT CGATCGCGAT GGCGGCGTTG AACGCGGGCC GGTTGGGGAT CGCGGCGTGT GCGGTGGGGT TGGCGCAGGC GGCGTGTGAT TACGCGACGC AGTACGCGCG GGGTCGTCGG CAGTTCGGGT CGCCGGTGAT TGATTTTCAG GGGGTGGGGT TCATGTTGGC CGATATGGCC ACGCAGATCA GCGCGGCGCG GGCGTTGGTG TCGCATGCGG CGCGGTTGCG TGACGCGGGG CGGGGTTTTC GGGTGGCGGC CGCGCAGGCG AAGTTGTTCG CCACGGATGT GGCGATGCGG GTGACCACGG ATGCGGTGCA GGTGTTGGGT GGGTACGGGT ATGTGTCGGA TCATCCGGTG GAGCGGTATT TCCGGGAGGC GAAGGTGTTG CAGATCGTGG AGGGCACGAA TCAGATCCAG CGGTTGGTGA TTTCGCGGGC CTTGGCGCAA GGCGGGGGTT AG
|
Protein sequence | MTVQRFFPSD EARAIVELAR DIAEGELAPR VNEFEARGEF PREVLRKLGA AGFLGLPYPE RYGGGGQPYE VYLQVLEELA YRWVVVAEAV SVHTLACFPV AEFGTDAQRE RWLPQMVGGD TLGAYCLTEP SGGSDAASLS TKAVRDGDGF VVEGTKAFIT HAGVADFHSV FARTGGPGAR GVSCLVLPEG TPGVVPQRLE HKMGLSASPT AQIVFDGARV GSDCLVGEEG RGFSIAMAAL NAGRLGIAAC AVGLAQAACD YATQYARGRR QFGSPVIDFQ GVGFMLADMA TQISAARALV SHAARLRDAG RGFRVAAAQA KLFATDVAMR VTTDAVQVLG GYGYVSDHPV ERYFREAKVL QIVEGTNQIQ RLVISRALAQ GGG
|
| |