More than 300 homologs were found in PanDaTox collection
for query gene Pnap_3620 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
393 aa  790    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_007948  Bpro_0590  acyl-CoA dehydrogenase-like  78.02 
 
 
414 aa  595  1e-169  Polaromonas sp. JS666  Bacteria  normal  0.882446  normal 
 
 
-
 
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  75 
 
 
397 aa  577  1e-164  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  71.93 
 
 
411 aa  542  1e-153  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_007347  Reut_A2181  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  62.11 
 
 
389 aa  451  1e-125  Ralstonia eutropha JMP134  Bacteria  normal  0.594963  n/a   
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  60.1 
 
 
389 aa  443  1e-123  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  63.08 
 
 
388 aa  443  1e-123  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  59.14 
 
 
404 aa  438  9.999999999999999e-123  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  59.38 
 
 
391 aa  431  1e-120  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  59.38 
 
 
391 aa  431  1e-120  Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  59.54 
 
 
399 aa  421  1e-116  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  57.95 
 
 
401 aa  421  1e-116  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  58.4 
 
 
402 aa  416  9.999999999999999e-116  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  58.35 
 
 
389 aa  414  1e-114  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  57.99 
 
 
402 aa  414  1e-114  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  52.39 
 
 
390 aa  397  1e-109  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  55.08 
 
 
391 aa  393  1e-108  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  56 
 
 
413 aa  382  1e-105  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  54.95 
 
 
398 aa  376  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  50.9 
 
 
391 aa  365  1e-100  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_011894  Mnod_1203  acyl-CoA dehydrogenase domain protein  50.76 
 
 
381 aa  362  6e-99  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  48.97 
 
 
383 aa  358  8e-98  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  49.61 
 
 
393 aa  353  4e-96  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_008688  Pden_5091  acyl-CoA dehydrogenase domain-containing protein  52.09 
 
 
378 aa  348  7e-95  Paracoccus denitrificans PD1222  Bacteria  normal  0.580305  normal 
 
 
-
 
NC_008044  TM1040_2239  acyl-CoA dehydrogenase-like  49.74 
 
 
384 aa  346  3e-94  Ruegeria sp. TM1040  Bacteria  normal  0.708615  normal 
 
 
-
 
NC_013131  Caci_5525  acyl-CoA dehydrogenase domain protein  43.75 
 
 
397 aa  273  3e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6321  acyl-CoA dehydrogenase domain protein  40.46 
 
 
383 aa  249  4e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.249622  normal  0.451082 
 
 
-
 
NC_012880  Dd703_3095  acyl-CoA dehydrogenase domain protein  38.32 
 
 
397 aa  238  1e-61  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2160  acyl-CoA dehydrogenase domain protein  44.09 
 
 
391 aa  221  9.999999999999999e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.828679 
 
 
-
 
NC_009953  Sare_1049  acyl-CoA dehydrogenase domain-containing protein  38.4 
 
 
405 aa  217  2e-55  Salinispora arenicola CNS-205  Bacteria  normal  0.239765  normal  0.0805171 
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  36.68 
 
 
379 aa  212  7e-54  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  37.32 
 
 
376 aa  211  2e-53  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  35.77 
 
 
388 aa  211  2e-53  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  40.8 
 
 
381 aa  210  3e-53  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  35.95 
 
 
384 aa  210  3e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  36.64 
 
 
379 aa  209  7e-53  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_013946  Mrub_0762  acyl-CoA dehydrogenase domain-containing protein  38.89 
 
 
381 aa  209  8e-53  Meiothermus ruber DSM 1279  Bacteria  normal  0.927466  normal  0.783766 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  35.95 
 
 
384 aa  208  1e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  41.9 
 
 
379 aa  208  1e-52  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
400 aa  208  1e-52  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_007333  Tfu_1282  putative acyl-CoA dehydrogenase  36.96 
 
 
392 aa  207  2e-52  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  37.88 
 
 
380 aa  207  2e-52  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  34.97 
 
 
388 aa  207  4e-52  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_014212  Mesil_0298  acyl-CoA dehydrogenase domain protein  38.29 
 
 
381 aa  206  5e-52  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  41.52 
 
 
379 aa  206  5e-52  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  37.54 
 
 
388 aa  205  9e-52  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  38.17 
 
 
398 aa  205  1e-51  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  40.82 
 
 
380 aa  205  1e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  36.29 
 
 
378 aa  204  2e-51  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  41.2 
 
 
379 aa  204  2e-51  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  35.96 
 
 
386 aa  204  3e-51  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_008701  Pisl_1436  butyryl-CoA dehydrogenase  34.04 
 
 
410 aa  204  3e-51  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.170652  hitchhiker  0.00553945 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  35.61 
 
 
381 aa  203  4e-51  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  35.61 
 
 
376 aa  203  5e-51  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  35.43 
 
 
376 aa  203  5e-51  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  35.43 
 
 
376 aa  203  5e-51  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  40.85 
 
 
379 aa  203  5e-51  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_008686  Pden_0714  butyryl-CoA dehydrogenase  42.47 
 
 
384 aa  203  5e-51  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  41.79 
 
 
379 aa  202  6e-51  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  40.85 
 
 
379 aa  202  6e-51  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  36.74 
 
 
402 aa  202  6e-51  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  35.61 
 
 
381 aa  202  6e-51  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  35.33 
 
 
376 aa  202  7e-51  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  41.28 
 
 
379 aa  202  7e-51  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  36.31 
 
 
381 aa  202  7e-51  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  37.46 
 
 
377 aa  202  7e-51  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  35.61 
 
 
381 aa  202  7e-51  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  35.33 
 
 
376 aa  202  9e-51  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  40.85 
 
 
379 aa  202  9e-51  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  35.33 
 
 
376 aa  202  9e-51  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  40.85 
 
 
379 aa  202  9.999999999999999e-51  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  40.85 
 
 
379 aa  202  9.999999999999999e-51  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  40.68 
 
 
382 aa  202  9.999999999999999e-51  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  40.49 
 
 
379 aa  202  9.999999999999999e-51  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_009523  RoseRS_2300  acyl-CoA dehydrogenase domain-containing protein  34.55 
 
 
414 aa  202  9.999999999999999e-51  Roseiflexus sp. RS-1  Bacteria  normal  0.242601  normal 
 
 
-
 
NC_010086  Bmul_3656  acyl-CoA dehydrogenase domain-containing protein  37.97 
 
 
377 aa  201  9.999999999999999e-51  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  40.68 
 
 
388 aa  202  9.999999999999999e-51  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  36.18 
 
 
377 aa  201  1.9999999999999998e-50  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009376  Pars_0456  butyryl-CoA dehydrogenase  34.44 
 
 
410 aa  201  1.9999999999999998e-50  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.820933  normal 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  39.39 
 
 
385 aa  201  3e-50  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  39.39 
 
 
385 aa  201  3e-50  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  35.13 
 
 
379 aa  200  3e-50  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3313  acyl-CoA dehydrogenase domain-containing protein  35.2 
 
 
384 aa  200  3e-50  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  34.97 
 
 
384 aa  200  3e-50  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  40.49 
 
 
379 aa  200  3.9999999999999996e-50  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  40.85 
 
 
379 aa  199  5e-50  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  37.11 
 
 
392 aa  199  5e-50  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4400  acyl-CoA dehydrogenase domain protein  35.2 
 
 
394 aa  199  5e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  38.02 
 
 
382 aa  199  6e-50  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  40.27 
 
 
380 aa  199  6e-50  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  34.75 
 
 
384 aa  199  7e-50  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  37.1 
 
 
377 aa  199  7e-50  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_009073  Pcal_0838  butyryl-CoA dehydrogenase  33.61 
 
 
410 aa  199  7.999999999999999e-50  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  34.75 
 
 
384 aa  199  7.999999999999999e-50  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  35.64 
 
 
379 aa  198  1.0000000000000001e-49  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  35.63 
 
 
376 aa  198  1.0000000000000001e-49  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  37.1 
 
 
377 aa  198  1.0000000000000001e-49  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  37.1 
 
 
377 aa  198  1.0000000000000001e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  37.1 
 
 
377 aa  198  1.0000000000000001e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  36.19 
 
 
379 aa  198  2.0000000000000003e-49  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
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