| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3313 |
|---|
| Symbol | |
|---|
| ID | 5163711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3894379 |
|---|
| End bp | 3895533 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640550799 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001232043 |
|---|
| Protein GI | 148265337 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCG AACTGTCTGC TGCCCAGAAA AAGGCGCGGG AAAATGCGTG CAGCTTTACC
GAGGAGGAGA TCATCCCCTT TGCCAGGGAG AACGACGCCA ACGAACGATT TCCCCTGGAA
ATCGTCAGGA AGCTGGGGGC GCGTGGACTG CTGGGGGGGA CTATTCCAGG GGCATACGGC
GGGGCGGAAT TGGACTGGAT CAGCGACGGG CTGATCTTCG AAGAGATCGG CCGGGGGTGC
TCGTCGGTCA GGACCACCGT TTCCGTGCAG GTTTCCCTCG TAGAGCAGGT GATTTTCAAC
TGGGGGAGCG AGGCGCAGCG CAGGTCCTAT CTGCCCGGGC TTTGCCGCGG TGAGATCCTC
GGCTGTTTTG CCCTGACGGA ACCGGGGGTT GGTAGCGACG CCGCGGGGAT CGGCGCCACG
GCAACGCCCC ATGGGGACGG CTGGCTCCTG AACGGGACAA AGAACTGGAT AACCAATGGC
GGAGTGGCGG ACATTGCCAT CGTCTTCGCC CGCACCGGTC CGGCGGCAGG CAACAAGGGG
ATATCCGCCT TTATCGTTGA TACGAAATCG CCCGGCTTCA GCTCCCTGGA GATCAGGGGA
AAGCTGGGAC TGAGGGCATC AAGCACGGCT GCGCTCACTT TCAGGGACTG TTTCCTCCCA
GGCGATGCGC TTTTGGGGGA GACGGGCGCC GGTCTGAAGA TAGCCCTGTC GGCCCTGGAT
AACGGCAGGT ACGGCGTGGC AGCCGGCTGT GTCGGCATCA TCCAAGGTTG TGTCGATGCC
TGCGTGGCCT ATGCCCGGAG GAGGCAGCAG TTCGGCCGTT CCATTGCCTC TTTCCAGCTG
GTTCAGGACA TGATCGCCCG GATGGCGGTT GATCTGGCTG CGGCACGGCT CCTCGTCTTT
CGCGCCGGCG AGCTGAAGAA CAGGGGAGCG GCCAATAGCC TGGAAACTTC CATGGCCAAG
TATTTTGCCA GCGAGGCGGC GGTGCGGGCG GCCACAGACG CCATCCAGGT GCATGGCGCC
TACGGCTATT CCAATGCTCA TCCGGTGGAG CGCTATCTGC GTGACGCCAA GGTTGCGACC
ATCTACGAGG GGACGTCCCA GATCCAGAAG CTGATCATCG GAGAGCATCT CCTCGGGGTC
AAGGCATACG TCTAG
|
|---|
| Protein sequence | MEFELSAAQK KARENACSFT EEEIIPFARE NDANERFPLE IVRKLGARGL LGGTIPGAYG
GAELDWISDG LIFEEIGRGC SSVRTTVSVQ VSLVEQVIFN WGSEAQRRSY LPGLCRGEIL
GCFALTEPGV GSDAAGIGAT ATPHGDGWLL NGTKNWITNG GVADIAIVFA RTGPAAGNKG
ISAFIVDTKS PGFSSLEIRG KLGLRASSTA ALTFRDCFLP GDALLGETGA GLKIALSALD
NGRYGVAAGC VGIIQGCVDA CVAYARRRQQ FGRSIASFQL VQDMIARMAV DLAAARLLVF
RAGELKNRGA ANSLETSMAK YFASEAAVRA ATDAIQVHGA YGYSNAHPVE RYLRDAKVAT
IYEGTSQIQK LIIGEHLLGV KAYV
|
|---|
| |