More than 300 homologs were found in PanDaTox collection
for query gene Pden_5091 on replicon NC_008688
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008688  Pden_5091  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
378 aa  744    Paracoccus denitrificans PD1222  Bacteria  normal  0.580305  normal 
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  68.06 
 
 
383 aa  503  1e-141  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2239  acyl-CoA dehydrogenase-like  67.02 
 
 
384 aa  479  1e-134  Ruegeria sp. TM1040  Bacteria  normal  0.708615  normal 
 
 
-
 
NC_011894  Mnod_1203  acyl-CoA dehydrogenase domain protein  65.97 
 
 
381 aa  458  9.999999999999999e-129  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  64.12 
 
 
389 aa  454  1e-127  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  60.42 
 
 
391 aa  438  9.999999999999999e-123  Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  60.42 
 
 
391 aa  438  9.999999999999999e-123  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  61.26 
 
 
390 aa  434  1e-120  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  62.44 
 
 
391 aa  432  1e-120  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  60.68 
 
 
399 aa  424  1e-117  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  58.73 
 
 
401 aa  419  1e-116  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  57.4 
 
 
393 aa  419  1e-116  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_007347  Reut_A2181  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  58.33 
 
 
389 aa  416  9.999999999999999e-116  Ralstonia eutropha JMP134  Bacteria  normal  0.594963  n/a   
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  58.14 
 
 
389 aa  417  9.999999999999999e-116  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  57.63 
 
 
402 aa  412  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  57.11 
 
 
402 aa  409  1e-113  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  58.07 
 
 
404 aa  404  1e-111  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  57.92 
 
 
388 aa  392  1e-108  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  56.76 
 
 
398 aa  386  1e-106  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  55.29 
 
 
391 aa  384  1e-105  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  54.55 
 
 
397 aa  362  8e-99  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  56.74 
 
 
413 aa  361  1e-98  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  52.09 
 
 
393 aa  334  1e-90  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  51.52 
 
 
411 aa  333  3e-90  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_007948  Bpro_0590  acyl-CoA dehydrogenase-like  48.14 
 
 
414 aa  296  4e-79  Polaromonas sp. JS666  Bacteria  normal  0.882446  normal 
 
 
-
 
NC_013131  Caci_5525  acyl-CoA dehydrogenase domain protein  46.5 
 
 
397 aa  275  1.0000000000000001e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2160  acyl-CoA dehydrogenase domain protein  49.71 
 
 
391 aa  261  2e-68  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.828679 
 
 
-
 
NC_012880  Dd703_3095  acyl-CoA dehydrogenase domain protein  41.58 
 
 
397 aa  260  3e-68  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6321  acyl-CoA dehydrogenase domain protein  43.8 
 
 
383 aa  245  9.999999999999999e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.249622  normal  0.451082 
 
 
-
 
NC_009953  Sare_1049  acyl-CoA dehydrogenase domain-containing protein  43.23 
 
 
405 aa  240  2.9999999999999997e-62  Salinispora arenicola CNS-205  Bacteria  normal  0.239765  normal  0.0805171 
 
 
-
 
NC_013739  Cwoe_4400  acyl-CoA dehydrogenase domain protein  40.23 
 
 
394 aa  235  1.0000000000000001e-60  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3276  acyl-CoA dehydrogenase-like  47.18 
 
 
382 aa  219  5e-56  Frankia sp. CcI3  Bacteria  normal  normal  0.863338 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
400 aa  211  2e-53  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  38.36 
 
 
378 aa  209  8e-53  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_011370  Rleg2_6081  acyl-CoA dehydrogenase domain protein  37.18 
 
 
381 aa  209  9e-53  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.517442  normal 
 
 
-
 
NC_007298  Daro_2353  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  38.8 
 
 
378 aa  208  1e-52  Dechloromonas aromatica RCB  Bacteria  normal  0.663187  normal  0.71414 
 
 
-
 
NC_010676  Bphyt_5650  acyl-CoA dehydrogenase domain protein  38.13 
 
 
377 aa  208  1e-52  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  39.94 
 
 
376 aa  207  3e-52  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  39.55 
 
 
377 aa  206  4e-52  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1570  acyl-CoA dehydrogenase domain protein  42.61 
 
 
383 aa  206  6e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3656  acyl-CoA dehydrogenase domain-containing protein  40.83 
 
 
377 aa  206  6e-52  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3574  putative acyl-CoA dehydrogenase  40.24 
 
 
377 aa  206  7e-52  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5126  acyl-CoA dehydrogenase domain-containing protein  43.4 
 
 
377 aa  204  1e-51  Burkholderia phymatum STM815  Bacteria  normal  normal  0.393324 
 
 
-
 
NC_007952  Bxe_B1084  butyryl-CoA dehydrogenase  38.4 
 
 
377 aa  205  1e-51  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0155468 
 
 
-
 
NC_012791  Vapar_4730  acyl-CoA dehydrogenase domain protein  38.46 
 
 
376 aa  204  1e-51  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  40.11 
 
 
377 aa  204  2e-51  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  43.01 
 
 
379 aa  204  2e-51  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  38.12 
 
 
377 aa  204  2e-51  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  40.25 
 
 
376 aa  204  2e-51  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  40.11 
 
 
377 aa  204  2e-51  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  40.11 
 
 
377 aa  204  2e-51  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_008391  Bamb_4385  acyl-CoA dehydrogenase domain-containing protein  39.83 
 
 
377 aa  203  5e-51  Burkholderia ambifaria AMMD  Bacteria  normal  0.351154  normal  0.113053 
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  39.83 
 
 
377 aa  202  6e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_013124  Afer_1526  acyl-CoA dehydrogenase domain protein  40.62 
 
 
404 aa  202  8e-51  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.84855  n/a   
 
 
-
 
NC_012857  Rpic12D_4086  acyl-CoA dehydrogenase domain protein  43.4 
 
 
377 aa  202  9e-51  Ralstonia pickettii 12D  Bacteria  normal  0.303595  normal  0.349393 
 
 
-
 
NC_010678  Rpic_3973  acyl-CoA dehydrogenase domain protein  43.4 
 
 
377 aa  202  9e-51  Ralstonia pickettii 12J  Bacteria  normal  0.78306  normal  0.788161 
 
 
-
 
NC_014150  Bmur_2026  acyl-CoA dehydrogenase domain protein  37.96 
 
 
641 aa  201  9.999999999999999e-51  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000211003  n/a   
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  39.05 
 
 
379 aa  201  1.9999999999999998e-50  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  39.05 
 
 
379 aa  201  1.9999999999999998e-50  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  42.01 
 
 
386 aa  200  3e-50  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_008686  Pden_0714  butyryl-CoA dehydrogenase  37.53 
 
 
384 aa  199  6e-50  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0732  acyl-CoA dehydrogenase domain protein  40.05 
 
 
379 aa  199  7e-50  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4353  acyl-CoA dehydrogenase domain protein  38.11 
 
 
385 aa  199  7.999999999999999e-50  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0408  acyl-CoA dehydrogenase domain protein  41.92 
 
 
378 aa  198  1.0000000000000001e-49  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  40.48 
 
 
381 aa  198  2.0000000000000003e-49  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1835  butyryl-CoA dehydrogenase  45.38 
 
 
379 aa  197  3e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.571593  n/a   
 
 
-
 
NC_010511  M446_2476  acyl-CoA dehydrogenase domain-containing protein  40.58 
 
 
380 aa  197  4.0000000000000005e-49  Methylobacterium sp. 4-46  Bacteria  normal  0.893721  normal  0.185436 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  40.7 
 
 
379 aa  196  6e-49  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0459  acyl-CoA dehydrogenase domain-containing protein  37.11 
 
 
376 aa  195  9e-49  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0176  acyl-CoA dehydrogenase domain-containing protein  43.17 
 
 
376 aa  195  1e-48  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1282  putative acyl-CoA dehydrogenase  37.5 
 
 
392 aa  195  1e-48  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  37.42 
 
 
376 aa  194  2e-48  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  39.38 
 
 
392 aa  194  2e-48  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  39.43 
 
 
379 aa  193  4e-48  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_011894  Mnod_2176  acyl-CoA dehydrogenase domain protein  37.99 
 
 
380 aa  193  5e-48  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.110006  n/a   
 
 
-
 
NC_013061  Phep_0136  acyl-CoA dehydrogenase domain protein  37.87 
 
 
379 aa  193  5e-48  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_01704  acyl-CoA dehydrogenase family member 8  38.58 
 
 
393 aa  192  7e-48  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.791292  n/a   
 
 
-
 
NC_007908  Rfer_3838  acyl-CoA dehydrogenase-like  36.16 
 
 
376 aa  192  7e-48  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  42.5 
 
 
380 aa  192  8e-48  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_008782  Ajs_3774  acyl-CoA dehydrogenase domain-containing protein  37.11 
 
 
376 aa  192  9e-48  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  35.14 
 
 
381 aa  192  1e-47  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  40.58 
 
 
379 aa  191  1e-47  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_011992  Dtpsy_3052  acyl-CoA dehydrogenase domain protein  37.11 
 
 
376 aa  192  1e-47  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008701  Pisl_1436  butyryl-CoA dehydrogenase  34.96 
 
 
410 aa  191  1e-47  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.170652  hitchhiker  0.00553945 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  40.58 
 
 
379 aa  191  2e-47  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  40.58 
 
 
379 aa  191  2e-47  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6770  acyl-CoA dehydrogenase domain protein  38.35 
 
 
390 aa  191  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.210456  normal  0.358603 
 
 
-
 
NC_007492  Pfl01_2865  Acyl-CoA dehydrogenase-like  37.17 
 
 
383 aa  191  2e-47  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0509295  normal  0.212771 
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  40.58 
 
 
379 aa  191  2e-47  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3576  acyl-CoA dehydrogenase domain protein  36.45 
 
 
380 aa  191  2e-47  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0247  Acyl-CoA dehydrogenase  38.24 
 
 
378 aa  191  2e-47  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  37.24 
 
 
382 aa  191  2e-47  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  42.09 
 
 
375 aa  191  2e-47  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  35.58 
 
 
389 aa  191  2e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  36.68 
 
 
376 aa  190  2.9999999999999997e-47  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  36.68 
 
 
376 aa  190  2.9999999999999997e-47  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  39.56 
 
 
380 aa  190  2.9999999999999997e-47  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  35.85 
 
 
417 aa  189  5e-47  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1555  acyl-CoA dehydrogenase domain-containing protein  36.28 
 
 
383 aa  189  5e-47  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  40.22 
 
 
379 aa  189  5e-47  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
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