Gene Bcen2424_4963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4963 
Symbol 
ID4452782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1972180 
End bp1973313 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content68% 
IMG OID639697019 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_838590 
Protein GI116693057 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.398605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.378723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGC TTTACACCGA AGATCAGCGG ATGATCCGCG ACGCCGCGCG CGCTTTCGCC 
ACCGAGATGC TGGCGCCGAA CGCCGCGCAG TGGGACCACG ACGCGCACCT GCCCGACGCG
ATCGTCGCGC AGCTCGGCGA GCTCGGCCTG CTCGGGATGA TCGTGCCGCA GGAACTGGGC
GGCTCGTATA CGGATTACGT GGCGTATGCG CTGGCGATGG AGGAAGTCGC GGCCGGCGAC
GCCGCGTGCG CGACGATGAT GAGCGTGCAC AACTCGGTCG GCTGCGGGCC GATCCTCGGC
TTCGGCACGC CCGCGCAGAA GGATCGCTGG CTGGCCGACA TGGCGGCCGG CCGCGTGATC
GGCGCATTCT GCCTGACCGA GCCGCATGCC GGTTCCGAGG CGAACAACCT GCGCACGCGG
GCCGAACTGC GCGACGGCCA ATGGGTGCTG AACGGCGCGA AGCAGTTCGT GACCAACGGC
CAGCGCGCCG GTGTCGCGAT CGTTTTTGCC ATGACGGACC CGGAAGCCGG CAAGCGCGGC
ATTTCCGCGT TCCTGGTGCC GACCGACACG CCCGGCTTCA TCGTCGGCAA GCCCGAGAAG
AAGATGGGCA TCCGCGCATC GGATACGTGC CCGATCACGT TCGAGAACTG CGCGATTCCG
GAAGAGAACC TGCTCGGCAA TCGCGGCGAA GGGTTGAAGA TCGCGCTGTC GAACCTCGAA
GGCGGGCGCA TCGGCATCGC CGCGCAGGCG CTCGGCATCG CGCGCGCCGC GTTCGACAAG
GCGCGCCGCT ATGCGGGCGA GCGCGTGCAG TTCGGCAAGC CGATCGCCGA GCATCAGGCG
ATCCAGCAGA AGCTCGCCGA CATGGCCGTG CAGATCAACG CCGCGCGCCT GCTCGTGCAT
CACGCGGCGA AGCTGCGCAC GGCCGGGCTG CCGTGTCTGT CGGAAGCGTC GCAGGCGAAG
CTGTTCGCGT CCGAGATGGC CGAGCGCGTG TGTTCGGATG CGATCCAGAT CCACGGCGGC
TACGGCTACC TGGTCGATTA CGAAGTCGAG CGTCACTATC GCGACGCGCG CATCACGCAG
ATTTACGAAG GCACCAGCGA AGTGCAGCGG ATGGTGATCG CGCGGCAGCT GTGA
 
Protein sequence
MDELYTEDQR MIRDAARAFA TEMLAPNAAQ WDHDAHLPDA IVAQLGELGL LGMIVPQELG 
GSYTDYVAYA LAMEEVAAGD AACATMMSVH NSVGCGPILG FGTPAQKDRW LADMAAGRVI
GAFCLTEPHA GSEANNLRTR AELRDGQWVL NGAKQFVTNG QRAGVAIVFA MTDPEAGKRG
ISAFLVPTDT PGFIVGKPEK KMGIRASDTC PITFENCAIP EENLLGNRGE GLKIALSNLE
GGRIGIAAQA LGIARAAFDK ARRYAGERVQ FGKPIAEHQA IQQKLADMAV QINAARLLVH
HAAKLRTAGL PCLSEASQAK LFASEMAERV CSDAIQIHGG YGYLVDYEVE RHYRDARITQ
IYEGTSEVQR MVIARQL