Gene Tfu_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1282 
Symbol 
ID3581081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1488500 
End bp1489678 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content69% 
IMG OID637684979 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_289343 
Protein GI72161686 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCAAG ACAGCTTCAG ACGAGAAGGG GCGATCGTGG AAGAGGGGCA GATGTTCGAC 
CTGGGACCGC GTCACCGCGA GATCCAGCGC ATCGCGCGGT CCGTGGCCGA GCGGGTGGAA
GAGTACGCTG ACGAGGCAGA CGCGGCGGTC GAGGTCCACC AGGGCGTGGC AGAGATCCTG
CGGGAGAGCG GTCTGGCACG CCATGTGGTT CCCGCCGCCT ACGGGGGAGA AAGCGACGTT
CTCGACCCAC TGGCGATCGC CGTCATCCGC GAAGCGCTGA TGTACACCTC GGCCCACCTG
GACTCCCTCT TCGGCATGCA GGGGGTGGGC AGCTACTCGC TGGCGGTCGG CGGAACCGAG
GAGCTCAAAC GCGAGTGGCT CCCTAAGGTG GCGCGCCTGG AAGCGATCGC CGGACTCGCC
CTGACCGAAC CGGACATCGG CTCCGACCTG CGCGGGGTCA CCACGACGAT CGAGGCCACC
CCCACCGGGG TGCGGGTCAG CGGACGCAAG TCGTTCATCA CCAACGGCGG TGCCGCCGAC
TTCTACTGTG TCCTCGGCCG GGAGGGCGAG GGCTACTCCA TGGTGCTGGT TCCCGCCGAC
ACCCCCGGGC TGACGGTCGA GCGTGGCGAC GACCTGATCG CTCCGCACAT CCTCGGCGAA
CTGCACTTCG ACGGTGCGGA AGTGCCCGAA AACCACCGGC TCGGCGTGCC GGGTAAAGCG
TTCTCCCTCA TGCTGCAGAC ACTCGCGGTG TTCCGGGTCA CCGTGGCGGG CTCGGCGGTC
GGCCTGGCCC AGGCTGCGCT GGACGAGGCG CTACGCCACG CCAAGACCCG TACCCAGTTC
GGCCGCCCGC TCCTGGAACT GGGGGCAGTG TCCCAGAGCC TGGCCCTGTC GTGGACCGAG
GTGGAGACGG CCCGGGCCAT CACCTACCGA GCGGCAGCGC TCGCCAAGAA CGATCCGCTC
GCGCACCTGG ACTACTCCTC GATCGCCAAG GTCAGCGCAA CGGAGGCGGC TGGACGAGTG
GTCGACCGCG CGGTGCAGGC CATGGGCCGC TTCGGGCTGA TCCGCGGGTC CAAGATCGAG
CGCCTCTACC GCAATGCCCG CCCGCTCCGC ATCTACGAGG GCGCCACGGA GGTCCTGCTC
GACTCCCTGG CCCGCAGGCT CGCCAAGCGC AGCAGCTAG
 
Protein sequence
MDQDSFRREG AIVEEGQMFD LGPRHREIQR IARSVAERVE EYADEADAAV EVHQGVAEIL 
RESGLARHVV PAAYGGESDV LDPLAIAVIR EALMYTSAHL DSLFGMQGVG SYSLAVGGTE
ELKREWLPKV ARLEAIAGLA LTEPDIGSDL RGVTTTIEAT PTGVRVSGRK SFITNGGAAD
FYCVLGREGE GYSMVLVPAD TPGLTVERGD DLIAPHILGE LHFDGAEVPE NHRLGVPGKA
FSLMLQTLAV FRVTVAGSAV GLAQAALDEA LRHAKTRTQF GRPLLELGAV SQSLALSWTE
VETARAITYR AAALAKNDPL AHLDYSSIAK VSATEAAGRV VDRAVQAMGR FGLIRGSKIE
RLYRNARPLR IYEGATEVLL DSLARRLAKR SS