More than 300 homologs were found in PanDaTox collection
for query gene Rmet_2199 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007347  Reut_A2181  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  89.69 
 
 
389 aa  695    Ralstonia eutropha JMP134  Bacteria  normal  0.594963  n/a   
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  100 
 
 
388 aa  781    Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  77.24 
 
 
389 aa  610  1e-173  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  69.85 
 
 
391 aa  527  1e-148  Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  69.85 
 
 
391 aa  527  1e-148  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  70.91 
 
 
389 aa  523  1e-147  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  71.5 
 
 
399 aa  516  1.0000000000000001e-145  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  67.36 
 
 
404 aa  502  1e-141  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  68.31 
 
 
391 aa  501  1e-141  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  65.8 
 
 
401 aa  489  1e-137  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  65.82 
 
 
402 aa  485  1e-136  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  66.06 
 
 
402 aa  484  1e-135  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  67.1 
 
 
398 aa  477  1e-133  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  62.37 
 
 
390 aa  478  1e-133  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  61.76 
 
 
383 aa  472  1e-132  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  65.46 
 
 
397 aa  465  9.999999999999999e-131  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  63.61 
 
 
413 aa  457  1e-127  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  61.34 
 
 
393 aa  456  1e-127  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_011894  Mnod_1203  acyl-CoA dehydrogenase domain protein  61.76 
 
 
381 aa  449  1e-125  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  60.41 
 
 
391 aa  448  1.0000000000000001e-124  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  62.37 
 
 
411 aa  442  1e-123  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_008044  TM1040_2239  acyl-CoA dehydrogenase-like  58.91 
 
 
384 aa  439  9.999999999999999e-123  Ruegeria sp. TM1040  Bacteria  normal  0.708615  normal 
 
 
-
 
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  63.08 
 
 
393 aa  439  9.999999999999999e-123  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_008688  Pden_5091  acyl-CoA dehydrogenase domain-containing protein  57.92 
 
 
378 aa  409  1e-113  Paracoccus denitrificans PD1222  Bacteria  normal  0.580305  normal 
 
 
-
 
NC_007948  Bpro_0590  acyl-CoA dehydrogenase-like  59.61 
 
 
414 aa  403  1e-111  Polaromonas sp. JS666  Bacteria  normal  0.882446  normal 
 
 
-
 
NC_012880  Dd703_3095  acyl-CoA dehydrogenase domain protein  44.76 
 
 
397 aa  292  7e-78  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6321  acyl-CoA dehydrogenase domain protein  47.38 
 
 
383 aa  283  5.000000000000001e-75  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.249622  normal  0.451082 
 
 
-
 
NC_013131  Caci_5525  acyl-CoA dehydrogenase domain protein  45.83 
 
 
397 aa  275  1.0000000000000001e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1049  acyl-CoA dehydrogenase domain-containing protein  46.34 
 
 
405 aa  275  1.0000000000000001e-72  Salinispora arenicola CNS-205  Bacteria  normal  0.239765  normal  0.0805171 
 
 
-
 
NC_007333  Tfu_1282  putative acyl-CoA dehydrogenase  39.55 
 
 
392 aa  244  9.999999999999999e-64  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  40.64 
 
 
379 aa  234  2.0000000000000002e-60  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3276  acyl-CoA dehydrogenase-like  46.74 
 
 
382 aa  234  3e-60  Frankia sp. CcI3  Bacteria  normal  normal  0.863338 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  40.64 
 
 
380 aa  233  5e-60  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_3055  acyl-CoA dehydrogenase domain-containing protein  41.98 
 
 
379 aa  233  5e-60  Caulobacter sp. K31  Bacteria  normal  0.350853  normal 
 
 
-
 
NC_013061  Phep_0136  acyl-CoA dehydrogenase domain protein  40.64 
 
 
379 aa  233  5e-60  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  37.87 
 
 
381 aa  232  7.000000000000001e-60  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2160  acyl-CoA dehydrogenase domain protein  45.72 
 
 
391 aa  231  1e-59  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.828679 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  39.77 
 
 
379 aa  230  4e-59  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_013739  Cwoe_4400  acyl-CoA dehydrogenase domain protein  41.28 
 
 
394 aa  230  4e-59  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  39.77 
 
 
379 aa  228  9e-59  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_013124  Afer_1526  acyl-CoA dehydrogenase domain protein  41.52 
 
 
404 aa  228  1e-58  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.84855  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  39.77 
 
 
379 aa  227  2e-58  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  39.77 
 
 
379 aa  227  3e-58  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4353  acyl-CoA dehydrogenase domain protein  40.59 
 
 
385 aa  227  3e-58  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  39.77 
 
 
379 aa  227  3e-58  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  39.6 
 
 
379 aa  226  4e-58  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  39.77 
 
 
379 aa  226  4e-58  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  35.71 
 
 
642 aa  226  4e-58  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  39.77 
 
 
379 aa  226  4e-58  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  39.47 
 
 
379 aa  226  5.0000000000000005e-58  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  36.52 
 
 
379 aa  226  5.0000000000000005e-58  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  39.77 
 
 
379 aa  226  6e-58  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  37.32 
 
 
379 aa  226  6e-58  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  38.48 
 
 
376 aa  226  7e-58  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  38.48 
 
 
381 aa  226  7e-58  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  38.42 
 
 
376 aa  225  8e-58  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  38.42 
 
 
376 aa  225  8e-58  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  39.47 
 
 
379 aa  225  9e-58  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  38.48 
 
 
376 aa  225  1e-57  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  39.35 
 
 
389 aa  225  1e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  38.19 
 
 
376 aa  224  2e-57  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  38.19 
 
 
376 aa  224  2e-57  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  36.34 
 
 
379 aa  224  2e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  39.18 
 
 
376 aa  224  3e-57  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  39.63 
 
 
417 aa  223  4e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  37.43 
 
 
400 aa  223  4.9999999999999996e-57  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  40.46 
 
 
382 aa  223  4.9999999999999996e-57  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  37.9 
 
 
381 aa  223  6e-57  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  38.66 
 
 
386 aa  222  7e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  38.19 
 
 
381 aa  222  8e-57  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  37.9 
 
 
376 aa  221  9.999999999999999e-57  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  36.34 
 
 
402 aa  221  1.9999999999999999e-56  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  41.23 
 
 
389 aa  221  1.9999999999999999e-56  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  40.39 
 
 
398 aa  221  1.9999999999999999e-56  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  38.48 
 
 
380 aa  221  1.9999999999999999e-56  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2026  acyl-CoA dehydrogenase domain protein  38.68 
 
 
641 aa  221  1.9999999999999999e-56  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000211003  n/a   
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  39.27 
 
 
395 aa  219  3.9999999999999997e-56  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  37.29 
 
 
382 aa  220  3.9999999999999997e-56  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  39.24 
 
 
379 aa  220  3.9999999999999997e-56  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  37.85 
 
 
380 aa  219  5e-56  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_3827  bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)  37.65 
 
 
379 aa  219  5e-56  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  37.61 
 
 
379 aa  219  7e-56  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  35.07 
 
 
379 aa  219  7.999999999999999e-56  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  40.24 
 
 
388 aa  218  1e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_013159  Svir_28760  acyl-CoA dehydrogenase  38.19 
 
 
382 aa  218  1e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.12851  normal  0.0971486 
 
 
-
 
NC_013946  Mrub_0762  acyl-CoA dehydrogenase domain-containing protein  40.23 
 
 
381 aa  218  2e-55  Meiothermus ruber DSM 1279  Bacteria  normal  0.927466  normal  0.783766 
 
 
-
 
NC_007517  Gmet_3307  Acyl-CoA dehydrogenase-like  38.02 
 
 
380 aa  218  2e-55  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  37.79 
 
 
386 aa  218  2e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_0741  acyl-CoA dehydrogenase domain protein  38.4 
 
 
417 aa  217  2.9999999999999998e-55  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.37799  normal  0.427722 
 
 
-
 
NC_013037  Dfer_3822  acyl-CoA dehydrogenase domain protein  38.81 
 
 
379 aa  216  4e-55  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.962066  normal  0.565208 
 
 
-
 
NC_009767  Rcas_3165  acyl-CoA dehydrogenase domain-containing protein  38.57 
 
 
445 aa  216  5e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.256023  normal 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  39.94 
 
 
376 aa  216  5e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  36.87 
 
 
378 aa  216  5.9999999999999996e-55  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_009523  RoseRS_2300  acyl-CoA dehydrogenase domain-containing protein  37.05 
 
 
414 aa  216  7e-55  Roseiflexus sp. RS-1  Bacteria  normal  0.242601  normal 
 
 
-
 
NC_009972  Haur_1248  acyl-CoA dehydrogenase domain-containing protein  38.33 
 
 
415 aa  215  9.999999999999999e-55  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.702512  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  39.07 
 
 
379 aa  214  9.999999999999999e-55  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_009380  Strop_0934  acyl-CoA dehydrogenase domain-containing protein  39.94 
 
 
387 aa  214  1.9999999999999998e-54  Salinispora tropica CNB-440  Bacteria  normal  normal  0.496704 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  39.35 
 
 
376 aa  214  1.9999999999999998e-54  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_013730  Slin_5641  Butyryl-CoA dehydrogenase  37.43 
 
 
379 aa  214  1.9999999999999998e-54  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  40.5 
 
 
390 aa  214  1.9999999999999998e-54  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
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