| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6218 |
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| Symbol | |
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| ID | 7975434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 948513 |
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| End bp | 949685 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796788 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002948047 |
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| Protein GI | 239820862 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.823092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGTG ACCCCCAAGC GTTCGAACAA TTCCTGGGCA GCCTGCGCAG CTACGTGCGC
GAGCGGCTGG TGCCCAACGA GGCGCGCGTG GCCGACGCCG ACGAAGTGCC CGCCGACCTG
GTGGCCGACA TGGCGGCGCA GGGCCTGTTC GGCTATTCGA TCCCCGAGGC CTATGGCGGT
GCGGGCATGA CGACCGAGGA GCTGGTGCTG GCGGCAATGG AGCTGTCGCA GTGCTCGGTG
GCCTTTCGGG CCCGTGTCGG CACCAACACC GGCATCGGCT CCGAAGCGCT GGTGGCCGAC
GGCACCGAGG CGCAGAAGCG GCGCTACCTT CCGCGGCTGG CCAGCGGCGA GCTGACCGGC
GCGTTCGCGC TGACAGAACC CGAGGCCGGC TCGGACGCCG TGTCGCTGCG CACCTCGGCG
CGGCGCGAGG GCGACCACTA CGTGCTCAAC GGCACCAAGT GCTTCATCAC CAACGCGCCG
ATCGCTGGCC TTTTCACGGT GATGGCGCGC ACCGACCCCG ACGACCTGTC GGCGCGCGGC
GTCACGGCCT TCCTGGTCGA GCGCGGCATG CCCGGGCTCA GCACCGGGCC GGCCTACAGG
AAGATGGGGC AGGCGGGCTC GCCCGTGTCC GAGGTGCACA TGAACGACTG CATCGTGCCG
GCGGAGAACG TCATTGGCGG GTGCGAAGGG CAGGGCTTCA AGACGGCGAT GAAGGTGCTG
AACAAGCAGC GCATCCACCT GGCGGCCCTG TGCATCGGGC CGGCGATCCG CATGCTGCAG
GACGCCGTGG CGTTCGTGTC CACGCGCAAG CAGTTCGGCC AGGCGCTCTC GGGCTTCCAG
CTGATCCAGG CGCTGATCGC CGACAGCCAG ACCGAGATCC ATGCAGCCCG CGCGCTCGTG
CTGGACACCG CGCGCAAGCG CGACGAAGGC ATCGACGTGA CGATGGAGGC GTCGATCTGC
AAGTACTTCG CGTCCGAGAT GTGCGGCCGC GTGGCCGACC GCAGCGTGCA GATGCTGGGC
GGCTACGGCT ACATTGCCGA CCACGGCATG GAGCGCTTCT ACCGCGACGT GCGGCTGTTC
CGGCTGTACG AAGGCACGAG CCAGATCCAC CAGCTCAACA TCGCCAGGCG CACGCTGGCC
AAGGTCGGCT ACGGCGGTGA AGGCGCCTCC TGA
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| Protein sequence | MQRDPQAFEQ FLGSLRSYVR ERLVPNEARV ADADEVPADL VADMAAQGLF GYSIPEAYGG
AGMTTEELVL AAMELSQCSV AFRARVGTNT GIGSEALVAD GTEAQKRRYL PRLASGELTG
AFALTEPEAG SDAVSLRTSA RREGDHYVLN GTKCFITNAP IAGLFTVMAR TDPDDLSARG
VTAFLVERGM PGLSTGPAYR KMGQAGSPVS EVHMNDCIVP AENVIGGCEG QGFKTAMKVL
NKQRIHLAAL CIGPAIRMLQ DAVAFVSTRK QFGQALSGFQ LIQALIADSQ TEIHAARALV
LDTARKRDEG IDVTMEASIC KYFASEMCGR VADRSVQMLG GYGYIADHGM ERFYRDVRLF
RLYEGTSQIH QLNIARRTLA KVGYGGEGAS
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