Gene Caul_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3055 
Symbol 
ID5900510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3317375 
End bp3318514 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content67% 
IMG OID641563557 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001684680 
Protein GI167647017 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.350853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCG CGCTCAGCGA CGATCAGATC GCCATTCAGG ATGCGGCCAA GGCCTTCGCC 
GAGGGACAGC TTGCCCCTCA TTCGGCCGAG TGGGACGAGA AGAGGCACTT CCCGGTCGAC
GTGCTGCGCC AAGCCGCCGA GCTGGGCTTC GCGGGCATCT ATGTGCAGGA AGACGTCGGC
GGCACGGGCC TCAAGCGCCT CGACGCCTCG ATCATCTTCG AGGCCCTCAG CTACGGCGAT
GTGCCGACCG CGGCCTATCT GACCATCCAC AACATGGCCT CGTGGATGAT CGACCGGTTC
GGCTCTGACG AGCTGCGCCG GCGCTATCTG CCACGCCTGA CCACCATGGA GCTGATCGCC
AGCTACTGCC TGACCGAGCC GGGCTCGGGC TCGGACGCGG CCAATATGCG CACCACGGCG
CGGCTGGACG GCGATCACTA TGTGCTGAAC GGCGGCAAGG CCTTCATCTC GGGCGGCGGC
GTTTCGGACG TCTATGTGGT CATGGCTCGC ACCGGCGTGG ATGGCGCCAA GGGCGTCTCG
GCCTTCGTGG TCGAGAAGGG GACGCCGGGC CTCAGCTTCG GCGCCAACGA GCGCAAGATG
GGCTGGAACA GCCAGCCGAC GGCGGCGGTG AACTTCGACG ACTGCCGCGT GCCGGTCGCC
AATCGCATCG GCCAGGAAGG CGAGGGCTTC CGCTTCGCCA TGATGGGCCT GGACGGCGGG
CGGCTGAACA TCGCCTCGTG CTCGCTGGGC GGGGCGGCCT TCGCGCTGGA CACGGCCAAG
GCCTATCTCG AGACTCGCAA GCAGTTCGGC AAGCCGCTGA AGGACTTCCA GGCCCTGCAG
TTCAAGCTGG CCGACATGGC CACCGAGCTG GAAGCCGCCC GCCTGATGGT GCGCCGCGCC
GCCCACGCGC TCGACAACCG CGACCCCCAA GCGACGAAGC TGTGCGCCAT GGCCAAGCGC
TTCGCCACCG ACGCCGGCTT CCAGGTGGCC AACGACGCCT TGCAGTTGCA CGGCGGCTAC
GGCTACCTGC AGGACTATCC GCTGGAGCGC ATCGTCCGGG ACCTCCGGGT GCACCAGATT
CTGGAAGGGA CCAACGAGAT CATGCGGGTG ATCATAGCGC GCGAGATGTT CCGGCAGTGA
 
Protein sequence
MDFALSDDQI AIQDAAKAFA EGQLAPHSAE WDEKRHFPVD VLRQAAELGF AGIYVQEDVG 
GTGLKRLDAS IIFEALSYGD VPTAAYLTIH NMASWMIDRF GSDELRRRYL PRLTTMELIA
SYCLTEPGSG SDAANMRTTA RLDGDHYVLN GGKAFISGGG VSDVYVVMAR TGVDGAKGVS
AFVVEKGTPG LSFGANERKM GWNSQPTAAV NFDDCRVPVA NRIGQEGEGF RFAMMGLDGG
RLNIASCSLG GAAFALDTAK AYLETRKQFG KPLKDFQALQ FKLADMATEL EAARLMVRRA
AHALDNRDPQ ATKLCAMAKR FATDAGFQVA NDALQLHGGY GYLQDYPLER IVRDLRVHQI
LEGTNEIMRV IIAREMFRQ