| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0741 |
|---|
| Symbol | |
|---|
| ID | 7268060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 918650 |
|---|
| End bp | 919903 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643565592 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_002462101 |
|---|
| Protein GI | 219847668 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.37799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.427722 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGA CCGCCAACTA TGACATGTTT CTCGGCCCCG AACACAACCT CCTGCGCCAA
ACGGTGCGTA ACTTCGCCGA ACGTGAAGTT GCTCCGTACA TCCGCGAATG GGATCGGAGT
GGCGCAAAAG CTGAAGGGCC GGAAGATCGC CCGCACTTGC GCCCGATCCT CAAACGGATG
GGCGAACTAG GCTTCCTCGG CATCTGTATT CCACAGCGGT ACGGTGGCGC CGGGATGGAT
TATCTGGCGC TCGCAGTTGT GTGCGAAGAG TTGGAACGGG TTGACAGCTT TCTGCGGGTT
GTCATGAGCG TGCATACCGG CCTCAATTCT CTCTCGCTCC TGCAATGGGG AACGGAAGAG
CAGAAACAGC GCTTCCTGGT ACCGCAGGCA CGTGGCGAGA AGCTGGCCGC CTACTGCTTG
ACCGAACCTA ACAGTGGCAC CGATGCCGCC GCCATGCAGG CTACTGCGCG CCGCGATGGT
GATGTCTATA TCCTCAACGG CGAGAAGATT TGGATTAGTC TCGCCGATCT GGCCGACAAC
TTTCTCGTCT TTGCCAAAAC CGACCCCGCT GCCGGACCAC GCGGCATCAC GGCGTTCATT
GTTGAACGCA CTATGCCCGG TGTGAGCAGT TATCCAATTC ACGGTAAATT GGGAGTACGG
GCCGGCAACA CCGGTGGTGT TGTATTCCAA GATGTCCGTG TACCACTCTC ACATCGGCTA
GGCGAAGAGG GTGAAGGTTT CAAGATTGCG ATGGCCGCGC TCGACAATGG CCGTTACACC
GTCGCTGCCG GTGCTACCGG CCTGATCCAA GCCAGCCTTG AAGCGAGCAT CCGTTATGCC
CGCGAACGAC AAACCTTCGG TGTGCCTATC GGCGAACACC AACTGGTCAA GCGAATGATC
AGTCATATGG TGCGCAAACT CGACACCTCG CGCTTGCTCG TCTACCGAGC CGGTTGGATG
AAGAATAAAG GCATTCGCAA CACCCGCGAA ACCACCCTCG CGAAATGGCA CGCGACGGTA
AGCAGTTTTG AAGCCGCCGA TGATGCGCTC CAGATTCACG GCGCGTATGG TTATGCCGAC
GAGTATCCGG TTGAGCGTTA TTTACGCAAC GCCCGTGGTG CGATCATCTA TGAGGGGACG
CGCGAGTTAC AAGAGCTGCT ACAGGCCGAT TTTGTGATGG GCTACCGCAA ATATCCAACC
CTGCGGTGTG AATTGCCGGC CTACGACCCG GAGCTTTGGG AAGGCGAAGC GTAG
|
|---|
| Protein sequence | MDLTANYDMF LGPEHNLLRQ TVRNFAEREV APYIREWDRS GAKAEGPEDR PHLRPILKRM
GELGFLGICI PQRYGGAGMD YLALAVVCEE LERVDSFLRV VMSVHTGLNS LSLLQWGTEE
QKQRFLVPQA RGEKLAAYCL TEPNSGTDAA AMQATARRDG DVYILNGEKI WISLADLADN
FLVFAKTDPA AGPRGITAFI VERTMPGVSS YPIHGKLGVR AGNTGGVVFQ DVRVPLSHRL
GEEGEGFKIA MAALDNGRYT VAAGATGLIQ ASLEASIRYA RERQTFGVPI GEHQLVKRMI
SHMVRKLDTS RLLVYRAGWM KNKGIRNTRE TTLAKWHATV SSFEAADDAL QIHGAYGYAD
EYPVERYLRN ARGAIIYEGT RELQELLQAD FVMGYRKYPT LRCELPAYDP ELWEGEA
|
|---|
| |