| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2239 |
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| Symbol | |
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| ID | 4077306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2352927 |
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| End bp | 2354081 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007561 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_614233 |
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| Protein GI | 99082079 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.708615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGACC AGAGTTTTCT GAATTGGCCC TTTTTCGACG AAGAGCATCG AGCTTGGGCT
GCCAAGGTCG AAGCTGTGGC CGAGGGCCTT GAGGTGGATC ACAGCGATAC CGATGCGGCC
TGTCGCAGGC TGGTGGCGGA CCTTGGCGCG GCTGGGGTGT TGCAGCCGAC TGCGGCTGCG
GGTGCCTCGA AGAGCCTCGA TGTGCGCAAG CTGTGCCTAG CGCGTGAGAT CCTCGCCCGC
CACGATGGGC TTGCGGATTT TGCCTTTGCC ATGCAGGGGC TTGGCACAGG CGCGATTTCG
CTGTTTGGAA CCGACGCGCA GAAAGCGGAG TGGCTGCCGA AAACCCGCAG CGGCGCGGCG
ATTGCTGCTT TTGCGCTGAC GGAGCCGCAG TCGGGGTCGG ATGTGGCGAA CTCCACCATG
ACGGCGGTGC GCGATGGTGA TGACTATGTG CTGAATGGTG AAAAGACCTG GATCTCCAAT
GGGGGGATCG CCGATGTCTA CACGCTGTTT GCCCGCACCG GAGAGGCACC GGGCGCCAAG
GGGCTCTCGG CCTTCATAGT CACACCGGAT CTGGACGGGT TTGAGGTGGT GGAGCGGCTC
GAGACCATCG CACCGCACCC GCTGGCGACC TTGCGGTTCA GCGATGTGCG CATCCCCGCA
AGCGCCATGA TCGGTGCGCC GGGGCAGGGG TTCCGTATCG CCATGTCGGT GCTGGATGTG
TTCCGCTCTA CCGTGGCGGC GGCGGCGCTC GGCTTTGCGC GCCGGGCATT GGACGAGGCC
TTGTGGCGTG TCACCGAGCG TCATGTGCAG GGCGCGCCGC TCTTTGATTT GCAGATGGTG
CAGGGGCATA TCGCCGATAT GGCGCTGGAT GTGGATGCGG CCGCGCTGCT GGTCTACCGC
GCGGCCTGGA CCAAGGACAG TGGTGCGGCG CGGGTCACGC GCGAGGCGGC AATGGCCAAG
CTGTTCTCGA CCGAGGCGGC ACAGGTCGTC ATCGACAAGG CGGTGCAGCT CTTTGGGGGG
GAGGGCGTGC GTTCGGGCGC GATGGTTGAA AAACTCTATC GCGAAATCAG GGCGTTGCGC
ATCTATGAGG GCGCGAGCGA CGTTCAGCGC GTGGTGATCG CGCGGCAGGC GATGATGGCA
TTGGAGGGCA AATGA
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| Protein sequence | MADQSFLNWP FFDEEHRAWA AKVEAVAEGL EVDHSDTDAA CRRLVADLGA AGVLQPTAAA
GASKSLDVRK LCLAREILAR HDGLADFAFA MQGLGTGAIS LFGTDAQKAE WLPKTRSGAA
IAAFALTEPQ SGSDVANSTM TAVRDGDDYV LNGEKTWISN GGIADVYTLF ARTGEAPGAK
GLSAFIVTPD LDGFEVVERL ETIAPHPLAT LRFSDVRIPA SAMIGAPGQG FRIAMSVLDV
FRSTVAAAAL GFARRALDEA LWRVTERHVQ GAPLFDLQMV QGHIADMALD VDAAALLVYR
AAWTKDSGAA RVTREAAMAK LFSTEAAQVV IDKAVQLFGG EGVRSGAMVE KLYREIRALR
IYEGASDVQR VVIARQAMMA LEGK
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