| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0081 |
|---|
| Symbol | |
|---|
| ID | 8396832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 100544 |
|---|
| End bp | 102472 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644994420 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003151855 |
|---|
| Protein GI | 257065599 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTTA AGACAACAGA TCAACATGAG GCCCTACGTA AAAAAGTTAG AGCTTTTGCT
GAAGAAAAAG TAAAACCAAT AGCATTCGAC CTAGATCAAA AGAATGAATT CCCAGATGAT
ATAGTTAAAG AAATGGGAGA ATTAGGATTC TTAGGAATAC CTTATCCTAA AGAATACGGT
GGTCAAGGTC TAGACGTTAT TTCTTATGCA ATCGTTGTAG AAGAATTATC AAGAGTAGAC
GGTGGTGTTG GTGTAATTTG TTCAGCACAT ACATCTTTAG GTTCATGGCC AATTTTTGCT
TTTGGTACAG AAGAACAAAA GAAAAAATAC CTAACTCCAC TTGCTAAGGG TGAAAAACTC
GGTGGATTTG GACTTACAGA AGAAAACGCA GGTTCAGACG CTGGTGGAAC AGAAACTACA
GCAGAACTTG ATGGTGATAA TTACATTCTT AATGGTAAAA AGATTTTTAT TACAAATGCT
CCAAAAGCTG ATACATATGT AGTGTTCGCA GTTACTACAC CAGGTATAGG AACACACGGA
ATTTCAGCTT TCATAGTAGA AAAAGACTTC GAAGGCTTCA CCTTCTCTGA TCACTACGAC
AAGCTAGGTA TCAGATCATC TTCTACAGCT GAACTTCACT TTGAAAATGT TAAGGTTCCA
AAAGAAAACC TACTAGGTAA GGAAGGTCAA GGATTCAAGA TCGCTATGGC TACCCTAGAT
GGTGGTAGAA TTGGTATAGC ATCTCAAGCT TTAGGTATAG GACAAGGCGC TTATGAATCT
GCCCTAGCTT ATGCTAAAGA ACGTGAACAA TTCGGTCTTC CAATAGCTCA CTTACAAGCA
AATACATTTA AACTTGCTGA TATGGCAACC CAGCTACATG GTGCAAGACT TATGATTTAT
CAAGCAGCAG AATTAAAAGA AAATCACGAA AGATATTCTG CAGAAGCTGC TATGGCTAAA
CAAGTTGCAT CAGACCTTGC TATGAAGATA TCAACAGAAG CTGTACAAAT CTACGGTGGT
TCTGGATTTA TCAAGGGTGT AGATGTTGAA AGATTCTTCA GAGATGCCAA GATTACACAA
ATCTACGAAG GAACTAACGA GATCATGAGA GTCGTAGTAG GTGCTAATAC TGTAGGTCGT
GCTCCAAAGA TGAAAAGAGC AGGGGGCAGA GGCAAAGATG CTGGCCCAAT AGCAGGCTTA
CGTAAGAAAG AAATCTACAC AGGAGATCCA AAAGAAGCAG TTAAAAAATT AGTTGCAGCT
CTTAAAAAAG ACGGATATGA CTTCACAGTT GGAATCGATC CAAACACACC AATCCCAGAA
GCACAAAGAG TAGTTGTAGC TGGACGTGGT ATTGGTGAGA AGAAAAATAT GAAACTAATC
GAAGATTTAG CTTACCAAGC AGGTGCAGCT ATTTCATCAT CAAGACCAGT TGCAGAAACA
CTTAAATACA TTCCACTAGA AAGATACATC GGAATGAGTG GTCAAACCTT TAAGGGTAAC
CTCTATATCG GAGTCGGAGT ATCAGGAGCA GGTCAACACT TGAAGGGAAT GAAAAACGCT
TCAACAATCG TTGCAATCAA TAGCAGTGCT AACGCTCCAA TCTTTAACAA CTGTGACTAC
GGTATCGTAG GAGATGCTAT GGTAATCCTT CCACTACTTA TCAAAGAACT TGATAATGGA
GAAGAAAAGA AACCAGCACC ACCTATGAAG AAGATGAAAA GATCTAAACC AAGGAAAATG
GCTCCCAAAG AAGATATTTA CGTGGATTTG GGATCTGGTT ACGAATATGA CCCAGAAGTA
GGCGATCCTA CACAAGGAGT TGAACCAGGA ACACCATTTG ACAAATTGCC AGATGAATGG
GTAAGTCCAG TTTCTGGAGA AGCTAAAGAA GAATTCATCA AACTAGAATT CCCAGAAGAC
AGAAAGTAG
|
|---|
| Protein sequence | MLFKTTDQHE ALRKKVRAFA EEKVKPIAFD LDQKNEFPDD IVKEMGELGF LGIPYPKEYG
GQGLDVISYA IVVEELSRVD GGVGVICSAH TSLGSWPIFA FGTEEQKKKY LTPLAKGEKL
GGFGLTEENA GSDAGGTETT AELDGDNYIL NGKKIFITNA PKADTYVVFA VTTPGIGTHG
ISAFIVEKDF EGFTFSDHYD KLGIRSSSTA ELHFENVKVP KENLLGKEGQ GFKIAMATLD
GGRIGIASQA LGIGQGAYES ALAYAKEREQ FGLPIAHLQA NTFKLADMAT QLHGARLMIY
QAAELKENHE RYSAEAAMAK QVASDLAMKI STEAVQIYGG SGFIKGVDVE RFFRDAKITQ
IYEGTNEIMR VVVGANTVGR APKMKRAGGR GKDAGPIAGL RKKEIYTGDP KEAVKKLVAA
LKKDGYDFTV GIDPNTPIPE AQRVVVAGRG IGEKKNMKLI EDLAYQAGAA ISSSRPVAET
LKYIPLERYI GMSGQTFKGN LYIGVGVSGA GQHLKGMKNA STIVAINSSA NAPIFNNCDY
GIVGDAMVIL PLLIKELDNG EEKKPAPPMK KMKRSKPRKM APKEDIYVDL GSGYEYDPEV
GDPTQGVEPG TPFDKLPDEW VSPVSGEAKE EFIKLEFPED RK
|
|---|
| |