| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7164 |
|---|
| Symbol | |
|---|
| ID | 6279155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3556125 |
|---|
| End bp | 3557333 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642618185 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_001890821 |
|---|
| Protein GI | 187921789 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.647387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGCCA ACACCGAACA GGATCTGCAT AGCGCGCTCG CGTGGCCGTT CTTCGAGCCG
CGTCATCGCG AACTGGCTGC AGGTATCGAA GCATGGTGCC GCGAGAAGCT GAAGCACGAA
GACCACAAGG ACGTCGACGC AACTTGTCGT CATCTTGTGC GTGAACTCGG CGCGGCGGGC
TGGCTGAAAT ATGGCGTGGG CGGCGTCGCG TACGGCGGCC ACGGCGACAC GATCGACACG
CGCGCCGTTT GCGTTCTGCG CGAAACGCTG GCCAAACACT CGGGACTCGC GGACTTCGCT
CTGGCGATGC AGGGACTCGG TTCAGGCGCC ATTTCGCTCG GCGGCACGCA CGAACAAAAG
ACCCGCTATC TGCCGCGCGT CGCTAACGGC ACGGCGCTCG CAGCGTTTGC GCTGTCCGAA
CCCGAAGCCG GTTCCGACGT CGCCGCCATG GCGCTCTCCG CCCGCGAGGA CGGCGACACC
TATGTGCTCG ACGGCGACAA GACGTGGATC TCCAACGGCG GCATCGCCGA TTTCTACGTG
GTGTTCGCCA GAACCGGCGA AGCGCCGGGC GCACGCGGCA TCAGCGCATT CATTGTCGAT
GCGGATACGC CGGGACTGGA GATCGCTGAA CGCATCGACG TGATCGCACC GCATCCGCTC
GCGCGTTTGC ACTTTGCCGG CGCGCGCGTG CCGCGCAGCC AGATGCTCGG CGCGCCCGGC
GAAGGTTTCA AGCTCGCCAT GCGCACGCTG GATATTTTCC GCACATCCGT GGCGGCGGCA
TCGCTCGGCT TCGCGCGTCA TGCGATGGCC GAAGGTATCT CGCGCGCAGC ATCGCGCAAG
ATGTTCGGGC AGACGCTCGG CGATTTTCAA CTGACGCAAG CCAAACTCGC GCAAATGGCG
TTGACCATCG ACAGCAGCGC GTTGCTGGTC TATCGCGCCG CGTGGCTGCG CGATCAAGGC
GAAAACGTCA CGCGCGAAGC CGCGATGGCG AAGTGGCACG CGAGCGAAGG CGCGCAACAG
GTGATCGACG CCGCCGTGCA ACTCTTTGGC GGCATGGGCG TGCAAAGCGG CACGGCCGTC
GAGATGCTGT ATCGCGAGAT TCGCGCGCTG CGCATTTACG AAGGCGCGAC CGAAGTGCAG
CAACTGATTA TCGGACGCGA TCTGTTGAAA GCGCACGCTG CCGCGACTGC CGGAGACAAC
GCCCAATGA
|
|---|
| Protein sequence | MSANTEQDLH SALAWPFFEP RHRELAAGIE AWCREKLKHE DHKDVDATCR HLVRELGAAG
WLKYGVGGVA YGGHGDTIDT RAVCVLRETL AKHSGLADFA LAMQGLGSGA ISLGGTHEQK
TRYLPRVANG TALAAFALSE PEAGSDVAAM ALSAREDGDT YVLDGDKTWI SNGGIADFYV
VFARTGEAPG ARGISAFIVD ADTPGLEIAE RIDVIAPHPL ARLHFAGARV PRSQMLGAPG
EGFKLAMRTL DIFRTSVAAA SLGFARHAMA EGISRAASRK MFGQTLGDFQ LTQAKLAQMA
LTIDSSALLV YRAAWLRDQG ENVTREAAMA KWHASEGAQQ VIDAAVQLFG GMGVQSGTAV
EMLYREIRAL RIYEGATEVQ QLIIGRDLLK AHAAATAGDN AQ
|
|---|
| |