Gene Pden_5091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5091 
Symbol 
ID4583652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp603925 
End bp605061 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content73% 
IMG OID639772394 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_918847 
Protein GI119387813 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.580305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATC GCAGCTTTCT GGACTGGCCC TTTTTCGAGA CCCGCCACCG CGAACTTTCG 
GCGGCGCTCG AGGACTGGTG CGCGGCGCAT CTGCCGGTGG ATCACGGTGA CGTGGATGCG
GCTTGCCGCG GGCTGGTCGC GGCGCTGGGG CAGGCGGGCT TTCTGCGCCA TAGCGGCGCG
GCCGAGGGCG AGGCGCTGGA CGTGCGCAGC CTGTGCCTGA TCCGCGAGAC GCTGGCGCGG
CACGACCCGC TGGCCGATTT CGCCTTTGCC ATGCAGGGGC TGGGCATGGG GGCGGTGTCG
CTGTTCGGCA CTCCCGGCCA GCGCGAATGG CTGGATCGGA CGCGCACGGG CCGGGCGATT
TCGGCCTTTG CGCTGACCGA GCCGGGCGCC GGCTCGGACG TGGCCAGCAC GGCGACACTG
GCCGAGCGCA CGCCGGGCGG CTGGCGGCTG ACGGGCGAAA AGACCTATAT CTCGAACGGC
GGCATCGCGG ATATTTACGT GATCTTCGCC CGCACGGGCG AGGCGCCCGG CGCGCGCGGC
CTTTCGGCCT TCCTGATGCC GGCCGACTGC GCCGGGCTGT CCGTCGCCGA GCGGATCGAG
GTCATCGCGC CGCATCCGCT GGCGCGGCTG AAGCTGGACG GGGTGGTGCT GCCGGATGCG
GCGCTGATCG GCCGGCCGGG CGAGGGCTTC AAGATCGCCA TGTCGGTGCT GGACGTGTTC
CGCCCCACCG TCGGCGCGGC GGCGCTTGGC ATGGCGCGGC GCGCGCTGGA CGAAGCCCTG
GCGCGGGTGC ACAGGCCGCG GGCCGGCGGC GGCGCGCTGG CCGATCATCA GATCGTGCAG
GGCCACCTGG CCGACATGGC CGTCAGGGTC GATGCGGCGG CGCTGCTGGT CTATCGCGCC
GCCTGGACCA AGGACATGGG CGCCCCCCGT GTCACCCGCG AGGCGGCGAT GGCCAAGCTT
TACGCCACCG AGGCCGCGCA GGAGGTGATC GACGCCGCGC TGCAGCTGCA TGGCGGCGAC
GGCGTGCGCC ACGGCACCGC GGTCGAGGCG CTTTACCGCG ACATCCGCGC CCTGCGCATC
TATGAGGGCG CCAGCGACGT GCAGCGCGTG GTGATCGCCC GGAGCGTGTT GGGATGA
 
Protein sequence
MADRSFLDWP FFETRHRELS AALEDWCAAH LPVDHGDVDA ACRGLVAALG QAGFLRHSGA 
AEGEALDVRS LCLIRETLAR HDPLADFAFA MQGLGMGAVS LFGTPGQREW LDRTRTGRAI
SAFALTEPGA GSDVASTATL AERTPGGWRL TGEKTYISNG GIADIYVIFA RTGEAPGARG
LSAFLMPADC AGLSVAERIE VIAPHPLARL KLDGVVLPDA ALIGRPGEGF KIAMSVLDVF
RPTVGAAALG MARRALDEAL ARVHRPRAGG GALADHQIVQ GHLADMAVRV DAAALLVYRA
AWTKDMGAPR VTREAAMAKL YATEAAQEVI DAALQLHGGD GVRHGTAVEA LYRDIRALRI
YEGASDVQRV VIARSVLG