More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_2278 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  100 
 
 
390 aa  787    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  62.63 
 
 
391 aa  495  1e-139  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  62.63 
 
 
391 aa  495  1e-139  Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  65.1 
 
 
383 aa  491  9.999999999999999e-139  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  63.75 
 
 
399 aa  488  1e-137  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  62.4 
 
 
389 aa  491  1e-137  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  65.01 
 
 
389 aa  490  1e-137  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  63.1 
 
 
404 aa  485  1e-136  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  63.35 
 
 
401 aa  484  1e-135  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  63.02 
 
 
402 aa  478  1e-134  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2239  acyl-CoA dehydrogenase-like  65.54 
 
 
384 aa  479  1e-134  Ruegeria sp. TM1040  Bacteria  normal  0.708615  normal 
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  64.52 
 
 
391 aa  479  1e-134  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  62.5 
 
 
402 aa  477  1e-133  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_007347  Reut_A2181  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  63.4 
 
 
389 aa  476  1e-133  Ralstonia eutropha JMP134  Bacteria  normal  0.594963  n/a   
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  62.21 
 
 
393 aa  474  1e-132  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  64.07 
 
 
413 aa  466  9.999999999999999e-131  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_011894  Mnod_1203  acyl-CoA dehydrogenase domain protein  62.57 
 
 
381 aa  462  1e-129  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  62.37 
 
 
388 aa  459  9.999999999999999e-129  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  60.57 
 
 
391 aa  447  1.0000000000000001e-124  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5091  acyl-CoA dehydrogenase domain-containing protein  61.26 
 
 
378 aa  434  1e-120  Paracoccus denitrificans PD1222  Bacteria  normal  0.580305  normal 
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  59.79 
 
 
398 aa  431  1e-119  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  52.42 
 
 
397 aa  382  1e-105  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  52.39 
 
 
393 aa  384  1e-105  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  51.74 
 
 
411 aa  363  2e-99  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_007948  Bpro_0590  acyl-CoA dehydrogenase-like  48.69 
 
 
414 aa  341  1e-92  Polaromonas sp. JS666  Bacteria  normal  0.882446  normal 
 
 
-
 
NC_012880  Dd703_3095  acyl-CoA dehydrogenase domain protein  42.71 
 
 
397 aa  299  5e-80  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6321  acyl-CoA dehydrogenase domain protein  46.42 
 
 
383 aa  290  4e-77  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.249622  normal  0.451082 
 
 
-
 
NC_009953  Sare_1049  acyl-CoA dehydrogenase domain-containing protein  44.42 
 
 
405 aa  285  9e-76  Salinispora arenicola CNS-205  Bacteria  normal  0.239765  normal  0.0805171 
 
 
-
 
NC_013131  Caci_5525  acyl-CoA dehydrogenase domain protein  44.94 
 
 
397 aa  273  5.000000000000001e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3276  acyl-CoA dehydrogenase-like  46.92 
 
 
382 aa  252  7e-66  Frankia sp. CcI3  Bacteria  normal  normal  0.863338 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  45.67 
 
 
380 aa  252  1e-65  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_1719  acyl-CoA dehydrogenase domain-containing protein  39.13 
 
 
389 aa  251  1e-65  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  47.5 
 
 
379 aa  250  4e-65  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  44.79 
 
 
379 aa  249  5e-65  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  39.14 
 
 
376 aa  249  6e-65  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  39.14 
 
 
376 aa  249  6e-65  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  39.03 
 
 
417 aa  249  7e-65  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  38.74 
 
 
381 aa  248  1e-64  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2160  acyl-CoA dehydrogenase domain protein  43.68 
 
 
391 aa  248  1e-64  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.828679 
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  38.67 
 
 
376 aa  247  2e-64  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  38.67 
 
 
376 aa  247  2e-64  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  38.58 
 
 
381 aa  246  4e-64  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  39.57 
 
 
379 aa  246  4e-64  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  38.4 
 
 
376 aa  246  4.9999999999999997e-64  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  39.68 
 
 
381 aa  246  4.9999999999999997e-64  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2026  acyl-CoA dehydrogenase domain protein  39.57 
 
 
641 aa  246  6.999999999999999e-64  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000211003  n/a   
 
 
-
 
NC_013124  Afer_1526  acyl-CoA dehydrogenase domain protein  43.17 
 
 
404 aa  245  9.999999999999999e-64  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.84855  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  38.68 
 
 
381 aa  245  9.999999999999999e-64  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  38.4 
 
 
376 aa  244  1.9999999999999999e-63  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  44.03 
 
 
380 aa  244  1.9999999999999999e-63  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  43.35 
 
 
400 aa  244  1.9999999999999999e-63  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_013739  Cwoe_4400  acyl-CoA dehydrogenase domain protein  39.9 
 
 
394 aa  244  1.9999999999999999e-63  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_28760  acyl-CoA dehydrogenase  40.16 
 
 
382 aa  243  3e-63  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.12851  normal  0.0971486 
 
 
-
 
NC_011146  Gbem_3576  acyl-CoA dehydrogenase domain protein  37.85 
 
 
380 aa  243  3e-63  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  38.13 
 
 
376 aa  243  3.9999999999999997e-63  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3307  Acyl-CoA dehydrogenase-like  37.91 
 
 
380 aa  243  3.9999999999999997e-63  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  43.04 
 
 
386 aa  243  3.9999999999999997e-63  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  43.46 
 
 
379 aa  243  3.9999999999999997e-63  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_009565  TBFG_13303  acyl-CoA dehydrogenase fadE25  38.93 
 
 
389 aa  243  5e-63  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  43.11 
 
 
379 aa  243  6e-63  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  38.87 
 
 
376 aa  242  7.999999999999999e-63  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  39.11 
 
 
394 aa  241  1e-62  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  45.82 
 
 
386 aa  242  1e-62  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  38.38 
 
 
379 aa  241  2e-62  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  37.53 
 
 
379 aa  240  2.9999999999999997e-62  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0136  acyl-CoA dehydrogenase domain protein  42.77 
 
 
379 aa  240  4e-62  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  43.46 
 
 
379 aa  239  5e-62  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_009077  Mjls_1336  acyl-CoA dehydrogenase domain-containing protein  37.95 
 
 
388 aa  239  5.999999999999999e-62  Mycobacterium sp. JLS  Bacteria  normal  0.11867  normal 
 
 
-
 
NC_008146  Mmcs_1300  acyl-CoA dehydrogenase-like protein  37.95 
 
 
388 aa  239  5.999999999999999e-62  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1317  acyl-CoA dehydrogenase domain-containing protein  37.95 
 
 
388 aa  239  5.999999999999999e-62  Mycobacterium sp. KMS  Bacteria  normal  normal  0.247959 
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  43.46 
 
 
379 aa  239  6.999999999999999e-62  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  43.46 
 
 
379 aa  239  6.999999999999999e-62  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  39.25 
 
 
388 aa  239  6.999999999999999e-62  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  43.46 
 
 
379 aa  239  8e-62  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  43.46 
 
 
379 aa  238  1e-61  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  43.46 
 
 
379 aa  238  1e-61  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  40.53 
 
 
388 aa  238  2e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  42.81 
 
 
388 aa  238  2e-61  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  43.11 
 
 
379 aa  237  3e-61  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0583  acyl-CoA dehydrogenase domain-containing protein  38.73 
 
 
379 aa  237  3e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.394739 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  40 
 
 
384 aa  236  5.0000000000000005e-61  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_013235  Namu_4214  acyl-CoA dehydrogenase domain protein  45.21 
 
 
386 aa  236  6e-61  Nakamurella multipartita DSM 44233  Bacteria  normal  0.234142  normal  0.067843 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  43.45 
 
 
380 aa  235  9e-61  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4353  acyl-CoA dehydrogenase domain protein  41.51 
 
 
385 aa  234  1.0000000000000001e-60  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4530  acyl-CoA dehydrogenase domain protein  41.4 
 
 
389 aa  235  1.0000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.335652  normal  0.412983 
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  37.1 
 
 
379 aa  234  1.0000000000000001e-60  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  37.87 
 
 
642 aa  233  3e-60  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  39.68 
 
 
387 aa  233  3e-60  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  37.67 
 
 
379 aa  233  4.0000000000000004e-60  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  36.87 
 
 
379 aa  233  5e-60  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0876  acyl-CoA dehydrogenase domain-containing protein  43.84 
 
 
387 aa  233  6e-60  Salinispora arenicola CNS-205  Bacteria  normal  0.189497  normal  0.119821 
 
 
-
 
NC_009921  Franean1_2188  acyl-CoA dehydrogenase domain-containing protein  42.59 
 
 
387 aa  232  7.000000000000001e-60  Frankia sp. EAN1pec  Bacteria  normal  normal  0.130468 
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  40.83 
 
 
382 aa  232  9e-60  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0409  acyl-CoA dehydrogenase domain-containing protein  41.96 
 
 
406 aa  232  9e-60  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1647  acyl-CoA dehydrogenase  39.43 
 
 
385 aa  231  1e-59  Thermobifida fusca YX  Bacteria  normal  0.658516  n/a   
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  38.83 
 
 
388 aa  231  1e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  37.18 
 
 
386 aa  231  1e-59  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  36.87 
 
 
379 aa  232  1e-59  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  44.29 
 
 
379 aa  231  2e-59  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_3053  Acyl-CoA dehydrogenase  40 
 
 
381 aa  231  2e-59  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.75901 
 
 
-
 
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