| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2199 |
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| Symbol | |
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| ID | 4039016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2408889 |
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| End bp | 2410055 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977593 |
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| Product | acyl-CoA dehydrogenase-like protein |
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| Protein accession | YP_584347 |
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| Protein GI | 94311137 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00319819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0749115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA AGACCTACCT TGAACTACCG TTCTTCGACG ATACGCACCG TTCGCTCGAA
CGCGATCTGG ATGCCTGGTG CGGCGAGAAC CTTTGCGGCG TCGATCACCA CGATGCCGAC
GCGGCGTGCC GCACGCTGGT GCGCCAGCTT GGGCAGGCGG GATGGCTCCG CTACTGCGTG
CCGGCGGCGT TCGGCGGCGC GCTACCCGCG CTCGATTCGC GCGCGCTTTG CCTGCTGCGC
GAGACACTGG CGCGCCATGA CGGTCTGGCT GACTTTGCTT TCGCGATGCA GGGCCTTGGC
TCGGGCGCGA TCACGCTGGC CGGCAGCGAC GCGGTGCGCG AGCGCTATCT TCCGCGCGTG
GCGAATGGCG AGGCCATTGC GGCATTCGCG CTGTCCGAGC CCGAGGCGGG TTCTGACGTG
GCGGCGATGC AATGCAGCGC GAAGCTGTCC GATGACGGCA CGCACTACGT GCTGAACGGC
GCCAAGACGT GGATATCTAA TGGCGGCATC GCCGACTTCT ATTGCGTGTT CGCGCGCACT
GGGGAGGCAG CCCGCGCGCG CGGCATCACC GCGTTCGTGG TGGATGCCAA TACTCCGGGC
CTGTCCATTG CAGAGCGCAT CGACGTGATC GCGCCACATC CTCTGGCAAC ACTGCGTTTC
GATGACTGCC GCGTACCCGT TGGCAACCGC CTGGGCGAGC CGGGGCAGGG CTTCAAGGTG
GCGATGATGA CACTCGACAT CTTCCGGGCC TCGGTGGCCG CCGCCGCGCT TGGCTTCGGT
CGCGCGGCGC TGGACGATGC GCTGGCACGC GCCACGTCGC GCCCGATGTT CGGCGGCGTG
CTGGCGGATC TGCAACTCAC GCAGGCGGCG ATCGGTGACA TGGCTACGGC CATTGATGCC
GCCGCGCTGC TGACTTATCG CGCCGCCTGG CTGCGCGATG TGAGGCAGCA GCGCACGACG
CGCGAGGCGG CGATGGCCAA GATGGTCGCC ACCGAGAACG CGCAGCAGGT CATCGACCGG
GCCGTGCAGA TGTTCGGCGG CCTCGGCGTC AAGGTTGGCA CGCGTGTGGA AAGCCTCTAC
CGCGAGATTC GCTCGCTGCG GATCTACGAA GGCGCCACTG AAGTGCAGAA GCTGATCATT
GCGCGCGAGA CGCTGGCAGC CCGATAG
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| Protein sequence | MSDKTYLELP FFDDTHRSLE RDLDAWCGEN LCGVDHHDAD AACRTLVRQL GQAGWLRYCV
PAAFGGALPA LDSRALCLLR ETLARHDGLA DFAFAMQGLG SGAITLAGSD AVRERYLPRV
ANGEAIAAFA LSEPEAGSDV AAMQCSAKLS DDGTHYVLNG AKTWISNGGI ADFYCVFART
GEAARARGIT AFVVDANTPG LSIAERIDVI APHPLATLRF DDCRVPVGNR LGEPGQGFKV
AMMTLDIFRA SVAAAALGFG RAALDDALAR ATSRPMFGGV LADLQLTQAA IGDMATAIDA
AALLTYRAAW LRDVRQQRTT REAAMAKMVA TENAQQVIDR AVQMFGGLGV KVGTRVESLY
REIRSLRIYE GATEVQKLII ARETLAAR
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