Gene Nther_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1881 
Symbol 
ID6315031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1970308 
End bp1971447 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content39% 
IMG OID642644263 
Productbutyryl-CoA dehydrogenase 
Protein accessionYP_001918041 
Protein GI188586496 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.593492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.222475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATTTTG AATTATCGAA TGAACACAAA ATGGTTCAAA AAACAATACG CGAGTTTGCT 
CAAAACGAAG TAGAGCCAAT TGCAGCAGAG ATAGATGAAA CCGAGAGATT TCCGACAGAA
AATGTAGATC AGATGCAAAG ATATAAAATG ATGGGAGTAA ATGTTCCGAA AGAGTACGGT
GGTGCAGGTG GTGATGAGTT AGCCTATGCC ATAACAGTAG AAGAGCTCTC AAGAGCTTGT
GCAACTACTG GTATCATTTG TTCTGCTCAT ACGTCATTAG CATGCTGGCC CATTTTAAAG
TATGGAACTG AAGAGCAAAA GCAGAAATAT CTAAAACCAT TAGCATCAGG TGAAAAAATT
GGAGCTTTTG GCCTCACAGA GCCTAATGCA GGTAGTGATG CTGGTTCCCA AGAGACAAGA
GCAGAACTAA AAGACGATCA TTATCTAATA AATGGCACAA AAATCTTTAT TACAAATGGT
GATGAAGCAG ATACTTATAT CGTCTTTGCA ATGACAGAAC CCGATAAAGG TGTAAAAGGA
ATCTCAGCCT TTATAGTAGA TAGAGATACT CCTGGCTTTT CAGTAGGTAA ACGTGAAAAG
AAAATGGGCA TCAAAGGTTC AGCTACAACT GAACTAATCT TTGAAAATAT GAAGGTACCG
AAAGAAAATC TATTAGGCAA AGAAGGCCAA GGTTTCAAGA TAGCTATGAA AACTTTAGAT
GGCGGTAGGA TAGGAGTAGC TGCACAAGCC CTGGGGATAG CACAAGGCGC TTTAGATGAG
ACAGTAAACT ACACCAAAGA AAGAGAACAA TTTAACAGGC CAATAGCTAA ATTTCAAGGA
CTTCAATTTG AAATGGCAGA CATGTCCACT CAAGTAGAAG CAGCAAGACT ATTGGTATAT
AGAGCAGCTA TGGCAAAAGC GCAAGGTAAA CCCTACACTA AAGAAGCAGC TATGGCCAAG
CTATATGCTT CAGAGGTAGC TATGCATGTA GCAAATAAAG CCATTCAACT ACATGGTGGT
TACGGATACA CCAAGGACTA TCCAGTAGAA CGAATGTTAA GAGATGCAAA AATCACAGAG
ATCTATGAAG GAACATCAGA AGTTCAAAGA ATGGTAATTT CAGGAGATCT GTTAAAATAG
 
Protein sequence
MNFELSNEHK MVQKTIREFA QNEVEPIAAE IDETERFPTE NVDQMQRYKM MGVNVPKEYG 
GAGGDELAYA ITVEELSRAC ATTGIICSAH TSLACWPILK YGTEEQKQKY LKPLASGEKI
GAFGLTEPNA GSDAGSQETR AELKDDHYLI NGTKIFITNG DEADTYIVFA MTEPDKGVKG
ISAFIVDRDT PGFSVGKREK KMGIKGSATT ELIFENMKVP KENLLGKEGQ GFKIAMKTLD
GGRIGVAAQA LGIAQGALDE TVNYTKEREQ FNRPIAKFQG LQFEMADMST QVEAARLLVY
RAAMAKAQGK PYTKEAAMAK LYASEVAMHV ANKAIQLHGG YGYTKDYPVE RMLRDAKITE
IYEGTSEVQR MVISGDLLK