Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2188 |
Symbol | |
ID | 5670588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2621051 |
End bp | 2622214 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641241109 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001506530 |
Protein GI | 158314022 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.130468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCCGA ACTTCGACAC CTACCGGCTC ACCGACACCC ACGTCGCCGT GCGCGAGGCG GTGCGCGATC TCGCCGAGAA GGAGATCGCC CCGTTCGCCG CCGACGCCGA CGAGAACGAG CGCTACCCCG TCGAGGCCCA CAACGCGTTG GTCCGTTCCG GGTTCAGCGC CGTACACATC CCGGAGAGCT ACGGCGGCCA GGGCGCCGAC TCGGTGACGA CCTGCATTGT CATCGAGGAG GTGGCCCGGG TCTGTGCCTC CTCGTCCCTC ATTCCGGCGG TCAACAAGCT CGGCACCATG CCGATCCTGC TGTCCGGCTC GGAGGATCTG AAGAAGCTGG TCCTGCCCTC CATCGCCAGC GGGGAGGCGA CCGCCTCCTA CGCGCTCTCG GAGCGGGAGG CCGGCTCCGA CACCGCGTCC ATGCGCACCC GGGCGCACCT CGACGGCGAC CACTGGGTCC TCAACGGCAC GAAGACCTGG ATCACCAACG CCGGCGAGTC CCTCTGGTAC ACCGTCATGG CCGTGACCGA CCCGAACGCG GCGAAGCCGG CCAACGGCAT CTCGGCGTTC GTCGTCCGGG CCGACGACCC CGGCTTCGAG GTCGGCTCGA AGGAGCGCAA ACTCGGCATC AAGGGCTCCC CCACCCGAGA GATCCACTTC GTCAACTGCA CGATCCCCGC CGACCGCATC ATCGGCGAGC CCGGCACCGG CCTGCGCACC GCCCTGGCCA CCCTCGACCA CACCCGGCCC ACAATCGGCG CCCAGGCCGT CGGCATCGCC CAGGGCGCGC TGGACGCGGC GATCGGCTAC GTCCGTGAGC GCCGCCAGTT CGGCCGCGCG ATCGCCGACA ACCAGGCCGT CCAGTTCATG CTCGCCGACA TGGCGATGAA GATCGAGGCC GCCCGGCACA TGGTGTACGT GGCCGCGGCC CGCGCCGAGC GCGGCGAGCC GAACCTCGGC TTCATCACGG CCGCGGCGAA GTGCTTCGCC TCGGACGTCG CCATGGAGGT GACCACCGAC GCCGTCCAGC TCTTCGGCGG CGCCGGCTAC ACCCGTGACT TCCCGGTCGA GCGGATGATG CGCGACGCAA AGATCACCCA GATCTACGAG GGCACCAACC AGATCCAGCG CGTCGTGATG TCCCGCGCCC TGCTCAAGGG CTGA
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Protein sequence | MDPNFDTYRL TDTHVAVREA VRDLAEKEIA PFAADADENE RYPVEAHNAL VRSGFSAVHI PESYGGQGAD SVTTCIVIEE VARVCASSSL IPAVNKLGTM PILLSGSEDL KKLVLPSIAS GEATASYALS EREAGSDTAS MRTRAHLDGD HWVLNGTKTW ITNAGESLWY TVMAVTDPNA AKPANGISAF VVRADDPGFE VGSKERKLGI KGSPTREIHF VNCTIPADRI IGEPGTGLRT ALATLDHTRP TIGAQAVGIA QGALDAAIGY VRERRQFGRA IADNQAVQFM LADMAMKIEA ARHMVYVAAA RAERGEPNLG FITAAAKCFA SDVAMEVTTD AVQLFGGAGY TRDFPVERMM RDAKITQIYE GTNQIQRVVM SRALLKG
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