| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4730 |
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| Symbol | |
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| ID | 7971740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5026430 |
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| End bp | 5027560 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795315 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002946601 |
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| Protein GI | 239817691 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTCA GTGCCGACCA GGAAGCCATC CGCGACGCGG TGCGCGATTT TTCGCAGGCC
GAGCTCTGGC CCAACGCCCC CAAGTGGGAC CGCGAGCACA GCTTCCCGAA GGAAGCCCAC
CAGGGCCTCG CGGCGCTCGG CGCCTACGGC ATCTGCGTGC CCGAGGAGCA CGGCGGCGCG
GGCCTCGACT ACCTCACGCT CGCGCTGGTG TTGGAAGAAA TCGCGGCCGG CGACGGCGGC
ACCAGCACCG CCATCAGCGT GACCAACTGC CCGGTCAACG CGATCCTCAT GCGCTACGGC
AATGCGCAGC AGAAGAAGCA GTGGCTCGAG CCGCTGGCGC AGGGCCGGAT GCTAGGCGCC
TTCTGCCTCA CCGAGCCGCA GGCCGGCAGC GATGCATCGA GCCTGCGCAC CACGGCGCGC
AAGGACGGCG ATGGCTACGT GATCGACGGC GTGAAGCAGT TCATCACCAG CGGCAAGAAC
GGCCAGGTCG CCATCGTCAT CGCGGTGACC GACAAGGGCG CGGGCAAGCG CGGCATGAGC
GCCTTCATCG TGCCCACCGA TGCGCCGGGC TACAGCGTGG CGCGGCTCGA GGACAAGCTG
GGCCAGCACA GCAGCGACAC CGCGCAGATC AATTTCGACG GCTGCCGCAT CCCGGTGGAA
AACCTCATCG GCGCCGAGGG CGAGGGCTAC AAGATCGCGC TGGGCGCGCT CGAGGGCGGC
CGCATCGGCA TTGCGGCGCA GAGCGTGGGC ATGGCGCGCA GCGCCTTCGA CGTGGCGCTG
GCCTATGCCA AGGAACGCCA GGCCTTCGGC GGGGCGATCT TCGACCAGCA GGCCGTCGGT
TTCAGGCTGG CCGAGTGCGC CACGCAGCTC GAAGCCGCGC GCCAGCTGAT CTGGCACGCT
GCCAGCCTGC GAGACGCCGG CCGCCCGTGC CTCAAGGAAG CCGCGATGGC CAAGCTGTTC
GCAAGCGAAA TGGCCGAGCG CGTCTGCAGC GCCGCGATCC AGACGCTGGG CGGCTATGGC
TACGTGAACG ACTTTCCGCT CGAACGCATT TATCGCGACG TGCGGGTGTG CCAGATCTAC
GAAGGCACCT CGGACATCCA GAAGCTGCTG ATCCAGCGCG CACTGGCCTG A
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| Protein sequence | MLLSADQEAI RDAVRDFSQA ELWPNAPKWD REHSFPKEAH QGLAALGAYG ICVPEEHGGA
GLDYLTLALV LEEIAAGDGG TSTAISVTNC PVNAILMRYG NAQQKKQWLE PLAQGRMLGA
FCLTEPQAGS DASSLRTTAR KDGDGYVIDG VKQFITSGKN GQVAIVIAVT DKGAGKRGMS
AFIVPTDAPG YSVARLEDKL GQHSSDTAQI NFDGCRIPVE NLIGAEGEGY KIALGALEGG
RIGIAAQSVG MARSAFDVAL AYAKERQAFG GAIFDQQAVG FRLAECATQL EAARQLIWHA
ASLRDAGRPC LKEAAMAKLF ASEMAERVCS AAIQTLGGYG YVNDFPLERI YRDVRVCQIY
EGTSDIQKLL IQRALA
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