Gene Pfl01_2865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2865 
Symbol 
ID3712185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3305000 
End bp3306151 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content61% 
IMG OID 
ProductAcyl-CoA dehydrogenase-like 
Protein accessionYP_348596 
Protein GI77459090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0509295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.212771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATC TCGAATTGAC TGAAGACCAG GTAATGATCC GCGACATGGC CCGGGACTTT 
GCGCGCGGCG AAATCGCGCC CCACGCGCAA GCCTGGGAAA AGGCCGGCTG GATCGATGAC
GGTCTGGTGG CAAAGATGGG CGAACTCGGT CTGCTGGGCA TGGTGGTGCC GGAGGAATGG
GGCGGCACCT ACGTCGACTA CGTGGCTTAT GCGCTTGCGG TGGAAGAGAT TTCCGCCGGT
GACGGCGCCA CCGGCGCGTT CATGAGCATT CACAACTCGG TGGGCTGCGG GCCGGTGCTG
AACTACGGCA GCGAAGAACA GAAGCAGACC TGGCTGGCGG ATCTGGCCAG CGGTGCAGTG
ATCGGCTGCT TCTGCCTGAC CGAGCCCCAG GCCGGCTCCG AAGCACACAA CCTGCGCACC
CGCGCCGAAC TGCGCGACGG GCAATGGGTA ATCAACGGCG CCAAGCAATT TGTCAGCAAT
GGCAAGCGGG CGAAACTGGC GATCGTGTTT GCGGTGACCG ATCCGGATCT GGGCAAGCGT
GGCATCTCGG CGTTTCTTGT GCCGACCGAC ATGCCGGGCT TCATCGTCGA TCGCACCGAA
CACAAGATGG GCATTCGCGC CTCCGACACC TGCGCGGTGA CGCTGAACAA TTGCAGCATT
CCCGAAGCCA ATCTGCTGGG TGAACGCGGT AAAGGTCTGG CGATTGCCCT TTCCAACCTG
GAAGGCGGAC GTATCGGTAT CGCCGCGCAA GCATTGGGCA TCGCCCGTGC GGCGTTTGAA
GCTGCACTGG GTTATGCCCG TGATCGAGTG CAGTTCGGCA AGGCGATTGT CGAGCATCAG
AGCATCGCCA ACCTGCTGGC GGACATGCAG ATGCAGATCA ACGCGGCGCG CTTGATGATC
CTGCACGCGG CGCGGCTGCG TACGGCGGGT AAACCGTGTC TGTCGGAGGC TTCACAGGCC
AAGCTGTTTG CGTCGGAAAT GGCCGAGAAG GTGTGCTCGT CAGCGATTCA GATTCATGGC
GGGTATGGGT ATCTGGAGGA TTACCCGGTT GAGAAGTACT ACCGGGATGC GCGGATTACC
CAGATTTACG AGGGATCGAG CGAGATACAG CGGATGGTGA TTGCTCGTGA GCTGAAGAAC
TATCAGTTGT GA
 
Protein sequence
MHDLELTEDQ VMIRDMARDF ARGEIAPHAQ AWEKAGWIDD GLVAKMGELG LLGMVVPEEW 
GGTYVDYVAY ALAVEEISAG DGATGAFMSI HNSVGCGPVL NYGSEEQKQT WLADLASGAV
IGCFCLTEPQ AGSEAHNLRT RAELRDGQWV INGAKQFVSN GKRAKLAIVF AVTDPDLGKR
GISAFLVPTD MPGFIVDRTE HKMGIRASDT CAVTLNNCSI PEANLLGERG KGLAIALSNL
EGGRIGIAAQ ALGIARAAFE AALGYARDRV QFGKAIVEHQ SIANLLADMQ MQINAARLMI
LHAARLRTAG KPCLSEASQA KLFASEMAEK VCSSAIQIHG GYGYLEDYPV EKYYRDARIT
QIYEGSSEIQ RMVIARELKN YQL