Gene Ajs_3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3774 
Symbol 
ID4671715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4005565 
End bp4006695 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content67% 
IMG OID639840804 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_987959 
Protein GI121596063 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGA CCCAAGACCA GGAAATGATC CGCGACGCCG TGCGCGACTT CGCCCAGCAG 
GAGCTGTGGC CGAATGCCGC GCGCTGGGAC AAGGAACACC ACTTTCCACG CGAGGCGCAC
CAGGGCCTGG CCGCACTGGG CGCTTACGGC ATCTGCGTGC CCGAGGAGCT GGGCGGTGCG
GGCCTGGACT ACCTGACGCT GGCCCTGGTG CTGGAGGAAA TCGCCGCCGG CGACGGTGGC
ACGAGCACCG CGATCAGCGT GACCAACTGC CCGGTCAACG CCATCCTCAT GCGCTACGGC
AACGCGCAGC AGCAGCGCGA CTGGCTCACG CCCCTGGCGC GCGGCGAGAT GCTGGGCGCG
TTCTGCCTGA CCGAGCCGCA TGTGGGCTCC GACGCTTCGG CCCTGCGCAC GACGGCCGTC
AAAGAAGGCA ACGAGTACGT CATCAACGGC GTCAAGCAGT TCATCACCAG TGGCAAGAAC
GGGCATGTGG CCATCGTGAT TGCCGTGACC GACAAGGGCG CGGGCAAGAA AGGCATGAGC
GCCTTCCTGG TGCCCACGAA TACGCCCGGC TACGTGGTCG CGCGCCTGGA GGACAAGCTG
GGCCAGCACA GCAGCGACAC GGCGCAGATC AACTTCGACC ACTGCCGCAT CCCGGCCGAG
AACCTCATTG GCGCGGAGGG CGAGGGCTAC AAGATCGCGC TGGGCGCGCT CGAAGGTGGC
CGCATCGGTA TCGCCGCGCA AAGCGTGGGC ATGGCACGCA GCGCGTTTGA TGCGGCGCTG
GCGTACTCGA AAGAGCGCGA GAGCTTCGGC CAGCCCATCT TCAACCACCA GGCCGTGGGC
TTTCGCCTGG CCGACTGCGC CACGCAGATC GAGGCCGCGC GCCAGCTCAT CTGGCATGCC
GCCGCGTTGC GCGACGCGGG CCGCCCCTGC TTGAAGGAAG CCGCCATGGC CAAGCTGTTT
GCCAGCGAGA TGGCCGAGCG CGTGTGCAGC GCCGCCATCC AGACGCTGGG CGGCTATGGC
GTGGTGAATG ACTTCCCGGT GGAACGCATC TACCGCGACG TGCGCGTGTG CCAGATCTAC
GAAGGCACGA GCGACGTACA AAAGATCATC ATCCAGCGCG CGCTGGCTTG A
 
Protein sequence
MLLTQDQEMI RDAVRDFAQQ ELWPNAARWD KEHHFPREAH QGLAALGAYG ICVPEELGGA 
GLDYLTLALV LEEIAAGDGG TSTAISVTNC PVNAILMRYG NAQQQRDWLT PLARGEMLGA
FCLTEPHVGS DASALRTTAV KEGNEYVING VKQFITSGKN GHVAIVIAVT DKGAGKKGMS
AFLVPTNTPG YVVARLEDKL GQHSSDTAQI NFDHCRIPAE NLIGAEGEGY KIALGALEGG
RIGIAAQSVG MARSAFDAAL AYSKERESFG QPIFNHQAVG FRLADCATQI EAARQLIWHA
AALRDAGRPC LKEAAMAKLF ASEMAERVCS AAIQTLGGYG VVNDFPVERI YRDVRVCQIY
EGTSDVQKII IQRALA