| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2500 |
|---|
| Symbol | |
|---|
| ID | 4693181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2832518 |
|---|
| End bp | 2833684 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639850266 |
|---|
| Product | isovaleryl-CoA dehydrogenase |
|---|
| Protein accession | YP_997263 |
|---|
| Protein GI | 121609456 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.353952 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCG ATCCCGAGGC CTTCGGGCAT TTCATAGATC AGTTGCGCGC CTTCGTGCGC
AAGGAACTGG TGCCGCACGA AGCCGAGGTG GCGGCGCGCG ACGAGGTGCC GCCCGAGATC
GTGCAGCGCA TGCGCGGGCA GGGCTTGTTC GGCTACTCGA TCCCCGCCGC CTATGGCGGC
GCCGGCATGA CGACCGAGGA ACTGATCCTG GCCGCGCTGG AGCTGTCGCA ATGCGCGGTG
GCGTTTCGCG CCCGCGTCGG CACCAACACC GGGATCGGCG CGGAAGCGCT GGTGGCCGAC
GGCACGCCGG CGCAAAAAGA CAAGTACCTG CCGATGCTGG CCAGCGGCGC ATGGACCAGC
GCCTTCGCGC TGACCGAGCC CGAGGCCGGC TCGGACGCCT GCGCACTGCG CACGCGCGCG
CTGCGCGACG CTGATCACTA CCTGATCAGT GGCAGCAAAT GCTTCATCAC CAATGCGCCG
ATCGCGCAGC TCTTTACCGT GCTGGCGCGC ACCGACCCGG CCCATCCGGG CGCGGGCGGC
ATCTCGGCCT TCCTGGTCGA GCGCGACACA CCGGGCCTGG TGGTCGGCAA GCCGTATCAG
AAGATGGGCC AGGCCGGCTC GCCAGTGGCG CCACTGTATT TCGACAACTG CCGCGTGCCC
GCAGCGAACC TGATCGGCGG CCAGGAGGGC CGGGGCTTCA AGACCGCGAT GAAGGTGCTG
AACAAGCAGC GCATTCACCT GGCGGCCCTG TGCATCGGCC CGGCCATGCG CATGTTGCAG
GAGGCGGTGC AGCACACCGC CGGGCGCCGC CAGTTCGGCC AGCCGGTGGG CAGCTTTCAG
TTGGTGCAGG CCATGGTGGC CGACTGCCAG ACCGAAATCC ATGCCGCCCG CGCACTGGTG
CTGGAGACAG CACGCCAGCG CGACCTGGGG CAGGACGTGG CGATGCAGGC GTCGATGTGC
AAGTACTTCG CCTCCGAAAT GTGCGCCCGC GTGGCCGACC GCTGCGTGCA GATGCTCGGT
GGCTACGGCT TCATTGCCGA CAACCCGGTC GAGCGCTTTT ACCGCGACGT GCGCCTGTTT
CGGCTGTACG AGGGCACCAG CCAGATCCAC CAATTGAACA TTGCCCGGCG CACCTATGCG
CAGGCCGGCC ATGAGTTCAG GGCATGA
|
|---|
| Protein sequence | MIRDPEAFGH FIDQLRAFVR KELVPHEAEV AARDEVPPEI VQRMRGQGLF GYSIPAAYGG
AGMTTEELIL AALELSQCAV AFRARVGTNT GIGAEALVAD GTPAQKDKYL PMLASGAWTS
AFALTEPEAG SDACALRTRA LRDADHYLIS GSKCFITNAP IAQLFTVLAR TDPAHPGAGG
ISAFLVERDT PGLVVGKPYQ KMGQAGSPVA PLYFDNCRVP AANLIGGQEG RGFKTAMKVL
NKQRIHLAAL CIGPAMRMLQ EAVQHTAGRR QFGQPVGSFQ LVQAMVADCQ TEIHAARALV
LETARQRDLG QDVAMQASMC KYFASEMCAR VADRCVQMLG GYGFIADNPV ERFYRDVRLF
RLYEGTSQIH QLNIARRTYA QAGHEFRA
|
|---|
| |